RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 PARK7Q99497 189 aaKnown RBP25.79■■□□□ 1.72
NME3-210ENST00000567271 EMILIN3Q9NT22 766 aa25.79■■□□□ 1.72
NME3-210ENST00000567271 FGAP02671 866 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 CYP2C8P10632 490 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 RASA1P20936 1047 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 SP3Q02447 781 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 ZNF287Q9HBT7 754 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 MYH8P13535 1937 aa25.78■■□□□ 1.72
NME3-210ENST00000567271 LOC285556D6RIA3 1793 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 SLC3A2P08195 630 aaKnown RBP25.77■■□□□ 1.72
NME3-210ENST00000567271 USP17L2Q6R6M4 530 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 C17orf99Q6UX52 265 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 TNS4Q8IZW8 715 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 FEZ1Q99689 392 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 KIAA1683Q9H0B3 1180 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 ADGRA2Q96PE1 1338 aa25.77■■□□□ 1.72
NME3-210ENST00000567271 USP14P54578 494 aa25.76■■□□□ 1.71
NME3-210ENST00000567271 PABPC4Q13310 644 aaKnown RBP eCLIP25.76■■□□□ 1.713e-7■■■■□ 23
NME3-210ENST00000567271 SIAH1Q8IUQ4 282 aa25.76■■□□□ 1.71
NME3-210ENST00000567271 ANAPC4Q9UJX5 808 aa25.76■■□□□ 1.71
NME3-210ENST00000567271 ZMYM6O95789 1325 aa25.76■■□□□ 1.71
NME3-210ENST00000567271 A0A1W2PRG0 241 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 PRDM1O75626 825 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 CHMLP26374 656 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 PDE4BQ07343 736 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 ZYXQ15942 572 aaKnown RBP25.75■■□□□ 1.71
NME3-210ENST00000567271 ZNF444Q8N0Y2 327 aaPredicted RBP25.75■■□□□ 1.71
NME3-210ENST00000567271 C12orf42Q96LP6 360 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.75■■□□□ 1.71
NME3-210ENST00000567271 CPA4Q9UI42 421 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 PNMA3Q9UL41 463 aa25.75■■□□□ 1.71
NME3-210ENST00000567271 HOXA7P31268 230 aaPredicted RBP25.74■■□□□ 1.71
NME3-210ENST00000567271 CTDSPL2Q05D32 466 aa25.74■■□□□ 1.71
NME3-210ENST00000567271 CTU1Q7Z7A3 348 aaKnown RBP25.74■■□□□ 1.71
NME3-210ENST00000567271 CLEC10AQ8IUN9 316 aa25.74■■□□□ 1.71
NME3-210ENST00000567271 ERO1AQ96HE7 468 aa25.74■■□□□ 1.71
NME3-210ENST00000567271 IL25Q9H293 177 aa25.74■■□□□ 1.71
NME3-210ENST00000567271 KANSL2Q9H9L4 492 aa25.74■■□□□ 1.71
NME3-210ENST00000567271 OSBPP22059 807 aa25.73■■□□□ 1.71
NME3-210ENST00000567271 ICA1Q05084 483 aa25.73■■□□□ 1.71
NME3-210ENST00000567271 PPP4R2Q9NY27 417 aa25.73■■□□□ 1.71
NME3-210ENST00000567271 CD99L2Q8TCZ2 262 aa25.72■■□□□ 1.71
NME3-210ENST00000567271 SMCR8Q8TEV9 937 aaPredicted RBP25.72■■□□□ 1.71
NME3-210ENST00000567271 ASCC2Q9H1I8 757 aaPredicted RBP25.72■■□□□ 1.71
NME3-210ENST00000567271 ARHGEF10LQ9HCE6 1279 aa25.72■■□□□ 1.71
NME3-210ENST00000567271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.72■■□□□ 1.71
NME3-210ENST00000567271 TMX2Q9Y320 296 aa25.72■■□□□ 1.71
NME3-210ENST00000567271 RAD50Q92878 1312 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 BCRP11274 1271 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 RUFY2Q8WXA3 655 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 DSCC1Q9BVC3 393 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 MCOLN1Q9GZU1 580 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 INCENPQ9NQS7 918 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 TACC3Q9Y6A5 838 aa25.71■■□□□ 1.71
NME3-210ENST00000567271 IGKV6D-41A0A0C4DH26 115 aa25.7■■□□□ 1.7
NME3-210ENST00000567271 FGRP09769 529 aa25.7■■□□□ 1.7
NME3-210ENST00000567271 EEF2P13639 858 aaKnown RBP25.7■■□□□ 1.7
NME3-210ENST00000567271 SH2D4AQ9H788 454 aa25.7■■□□□ 1.7
NME3-210ENST00000567271 GREB1LQ9C091 1923 aaPredicted RBP25.69■■□□□ 1.7
NME3-210ENST00000567271 VCAM1P19320 739 aa25.69■■□□□ 1.7
NME3-210ENST00000567271 IRX3P78415 501 aaPredicted RBP25.69■■□□□ 1.7
NME3-210ENST00000567271 CAP1Q01518 475 aa25.69■■□□□ 1.7
NME3-210ENST00000567271 BMP2KLQ5H9B9 411 aa25.69■■□□□ 1.7
NME3-210ENST00000567271 NEDD1Q8NHV4 660 aa25.69■■□□□ 1.7
NME3-210ENST00000567271 USP17L15C9J2P7 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L13C9JLJ4 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L11C9JVI0 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L18D6R9N7 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L22D6RA61 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L17D6RBQ6 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L19D6RCP7 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L20D6RJB6 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 LACTBP83111 547 aaPredicted RBP25.68■■□□□ 1.7
NME3-210ENST00000567271 TFAP4Q01664 338 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 ATP2B2Q01814 1243 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 USP17L24Q0WX57 530 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 FAM47AQ5JRC9 791 aa25.68■■□□□ 1.7
NME3-210ENST00000567271 P2RX7Q99572 595 aaKnown RBP25.68■■□□□ 1.7
NME3-210ENST00000567271 ORC4O43929 436 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 TSPY3P0CV98 308 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 TSPY8P0CW00 308 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 GCLCP48506 637 aaPredicted RBP25.67■■□□□ 1.7
NME3-210ENST00000567271 HAND2P61296 217 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 PKN2Q16513 984 aaKnown RBP25.67■■□□□ 1.7
NME3-210ENST00000567271 KIAA1755Q5JYT7 1200 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 CATSPERGQ6ZRH7 1159 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 OTOP1Q7RTM1 612 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 NBPF3Q9H094 633 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 EFCC1Q9HA90 598 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 NYAP2Q9P242 653 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 TRIM17Q9Y577 477 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 PLIN4Q96Q06 1357 aa25.67■■□□□ 1.7
NME3-210ENST00000567271 ZNF213O14771 459 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 SGSM2O43147 1006 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 KIF22Q14807 665 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 ARHGEF6Q15052 776 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 LPAR1Q92633 364 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 ARHGAP39Q9C0H5 1083 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 VCPKMTQ9H867 229 aa25.66■■□□□ 1.7
NME3-210ENST00000567271 HERVK_113P62684 666 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms