RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 POSTNQ15063 836 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 TSNAXIP1Q2TAA8 658 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CC2D2BQ6DHV5 1058 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 INTS8Q75QN2 995 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 ZNF804AQ7Z570 1209 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 IPO4Q8TEX9 1081 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 RUNDC3BQ96NL0 473 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC85AQ96PX6 553 aaPredicted RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 RAB17Q9H0T7 212 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 BCAP29Q9UHQ4 241 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 STX8Q9UNK0 236 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CPSF1Q10570 1443 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 PHLPP2Q6ZVD8 1323 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CETN3O15182 167 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 FLOT1O75955 427 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 MYL1P05976 194 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 RHOXF2BP0C7M4 288 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 ERCC5P28715 1186 aaPredicted RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 ZBTB16Q05516 673 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 KARSQ15046 597 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 FYB2Q5VWT5 728 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 TTC6Q86TZ1 520 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 TMEM87AQ8NBN3 555 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 PHACTR3Q96KR7 559 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 NLRP3Q96P20 1036 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 EYA1Q99502 592 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 RHOXF2Q9BQY4 288 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 GPR108Q9NPR9 543 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 SPINK5Q9NQ38 1064 aaPredicted RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 PUF60Q9UHX1 559 aaKnown RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CLEC11AQ9Y240 323 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 NFE2L3Q9Y4A8 694 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CALUO43852 315 aaPredicted RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 SLC8A1P32418 973 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 IRX4P78413 519 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 ELF2Q15723 593 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CLEC17AQ6ZS10 378 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 RETREG2Q8NC44 543 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 OR8K1Q8NGG5 319 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 GABPB2Q8TAK5 448 aaPredicted RBP4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 TRERF1Q96PN7 1200 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 VCXQ9H320 206 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 SAR1BQ9Y6B6 198 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 SPDYE3A6NKU9 549 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 H7C1D1 291 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 DNM2P50570 870 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 DNA2P51530 1060 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 SNX16P57768 344 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 TFCP2Q12800 502 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 MYSM1Q5VVJ2 828 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 HEATR3Q7Z4Q2 680 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 LRRC8AQ8IWT6 810 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC144CPQ8IYA2 1237 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 ATP6V0A2Q9Y487 856 aa4.85□□□□□ -1.63
LPCAT2-208ENST00000566915 FAM13AO94988 1023 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 KRT9P35527 623 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ZSCAN26Q16670 478 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TXNRD1Q16881 649 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CEP57Q86XR8 500 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 DIS3L2Q8IYB7 885 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CSGALNACT2Q8N6G5 542 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CNBD1Q8NA66 436 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 WDR66Q8TBY9 1149 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 STMN2Q93045 179 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CABS1Q96KC9 395 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TCEANC2Q96MN5 208 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 NT5C3AQ9H0P0 336 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TMX1Q9H3N1 280 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ANTXR1Q9H6X2 564 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CPSF2Q9P2I0 782 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ANAPC4Q9UJX5 808 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 FRMD4BQ9Y2L6 1034 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CDK12Q9NYV4 1490 aaPredicted RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 USP19O94966 1318 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ERBB3P21860 1342 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 KIF3CO14782 793 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 KCNQ2O43526 872 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ZEB2O60315 1214 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CIB2O75838 187 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 U2AF2P26368 475 aaKnown RBP eCLIP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 OAS2P29728 719 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 MAGEA1P43355 309 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SEMA3FQ13275 785 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 R3HDM1Q15032 1099 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 PUM3Q15397 648 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 LGSNQ5TDP6 509 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TMC4Q7Z404 712 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 APBB1IPQ7Z5R6 666 aaPredicted RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 LRRC2Q9BYS8 371 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 MTFR1LQ9H019 292 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 BICC1Q9H694 974 aaKnown RBP4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SH2D4AQ9H788 454 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 EXOC7Q9UPT5 735 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 MTMR6Q9Y217 621 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 ITSN1Q15811 1721 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms