RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CASP14P31944 242 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 GUCY1A2P33402 732 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 MCAMP43121 646 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 FILIP1LQ4L180 1135 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 TOM1L2Q6ZVM7 507 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 CPLX3Q8WVH0 158 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 RHOXF2Q9BQY4 288 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.44
COMMD4-215ENST00000566843 HSP90B2PQ58FF3 399 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 FOXR1Q6PIV2 292 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 LRRC31Q6UY01 552 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
COMMD4-215ENST00000566843 CSRNP2Q9H175 543 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 BTG4Q9NY30 223 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
COMMD4-215ENST00000566843 SLC12A7Q9Y666 1083 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 RIC1Q4ADV7 1423 aa17.78■□□□□ 0.44
COMMD4-215ENST00000566843 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-215ENST00000566843 UBR2Q8IWV8 1755 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 FXR1P51114 621 aaKnown RBP eCLIP17.77■□□□□ 0.44
COMMD4-215ENST00000566843 EVA1CP58658 441 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-215ENST00000566843 WWC2Q6AWC2 1192 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 USP49Q70CQ1 688 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 GOLGA6L1Q8N7Z2 621 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 ACRBPQ8NEB7 543 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 PLA2G12BQ9BX93 195 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
COMMD4-215ENST00000566843 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.43
COMMD4-215ENST00000566843 PPP1R3GB7ZBB8 358 aa17.77■□□□□ 0.43
COMMD4-215ENST00000566843 ERVK-24P63145 666 aa17.77■□□□□ 0.43
COMMD4-215ENST00000566843 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.43
COMMD4-215ENST00000566843 TAOK2Q9UL54 1235 aa17.77■□□□□ 0.43
COMMD4-215ENST00000566843 CSF1RP07333 972 aa17.76■□□□□ 0.43
COMMD4-215ENST00000566843 NOA1Q8NC60 698 aaKnown RBP17.76■□□□□ 0.43
COMMD4-215ENST00000566843 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
COMMD4-215ENST00000566843 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
COMMD4-215ENST00000566843 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
COMMD4-215ENST00000566843 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 TFRCP02786 760 aaKnown RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 CCDC102AQ96A19 550 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 GSDMAQ96QA5 445 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 PIH1D3Q9NQM4 214 aaKnown RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 ZSWIM5Q9P217 1185 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 TCRBV5S4A2TA0A5A2 114 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 LRRC10BA6NIK2 292 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 ABL1P00519 1130 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 APPP05067 770 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 STX17P56962 302 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 CORO7P57737 925 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 DPYDQ12882 1025 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 CYP26C1Q6V0L0 522 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 PAGE5Q96GU1 130 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-215ENST00000566843 CHD4Q14839 1912 aa17.75■□□□□ 0.43
COMMD4-215ENST00000566843 A0A087X0B3 334 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 EIF3CLB5ME19 914 aaKnown RBP17.74■□□□□ 0.43
COMMD4-215ENST00000566843 DEXIO95424 95 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 A1BGP04217 495 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 EIF3CQ99613 913 aaKnown RBP17.74■□□□□ 0.43
COMMD4-215ENST00000566843 ABHD10Q9NUJ1 306 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 RIPOR2Q9Y4F9 1068 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
COMMD4-215ENST00000566843 NR5A1Q13285 461 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 TRIM14Q14142 442 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 RTN1Q16799 776 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-215ENST00000566843 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 MYH8P13535 1937 aa17.74■□□□□ 0.43
COMMD4-215ENST00000566843 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
COMMD4-215ENST00000566843 PDE6AP16499 860 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 USP14P54578 494 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 KLHL10Q6JEL2 608 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 CNNM2Q9H8M5 875 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 FAM204AQ9H8W3 233 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 KCPQ6ZWJ8 1503 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 PPFIA4O75335 1185 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 SYF2O95926 243 aaKnown RBP17.73■□□□□ 0.43
COMMD4-215ENST00000566843 RCAN1P53805 252 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 PAXIP1Q6ZW49 1069 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-215ENST00000566843 TRAPPC11Q7Z392 1133 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 INCENPQ9NQS7 918 aa17.73■□□□□ 0.43
COMMD4-215ENST00000566843 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
COMMD4-215ENST00000566843 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-215ENST00000566843 MCM3P25205 808 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 KRT31Q15323 416 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 TTC31Q49AM3 519 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-215ENST00000566843 CCDC148Q8NFR7 591 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 OXER1Q8TDS5 423 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 KRT23Q9C075 422 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 EPB41L4AQ9HCS5 686 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-215ENST00000566843 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms