RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 RESTQ13127 1097 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 CRACR2BQ8N4Y2 399 aaPredicted RBP18.44■□□□□ 0.54
VAC14-208ENST00000566655 NUP133Q8WUM0 1156 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 PHKBQ93100 1093 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 CEP95Q96GE4 821 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 MYH1P12882 1939 aa18.44■□□□□ 0.54
VAC14-208ENST00000566655 CCDC196A0A1B0GTZ2 297 aa18.43■□□□□ 0.54
VAC14-208ENST00000566655 UBE2Q2LH0YL09 131 aa18.43■□□□□ 0.54
VAC14-208ENST00000566655 CPLX2Q6PUV4 134 aaKnown RBP18.43■□□□□ 0.54
VAC14-208ENST00000566655 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
VAC14-208ENST00000566655 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
VAC14-208ENST00000566655 MTMR4Q9NYA4 1195 aa18.43■□□□□ 0.54
VAC14-208ENST00000566655 KIF3AQ9Y496 699 aa18.43■□□□□ 0.54
VAC14-208ENST00000566655 DDX11L8A8MPP1 907 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 PLEKHA8P1O95397 391 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 TMTC3Q6ZXV5 915 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 FAM83AQ86UY5 434 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 PNMA1Q8ND90 353 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 AIFM3Q96NN9 605 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 KAT14Q9H8E8 782 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 TMOD2Q9NZR1 351 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
VAC14-208ENST00000566655 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 FAM196BA6NMK8 535 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 GUCY1A2P33402 732 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
VAC14-208ENST00000566655 RRP1BQ14684 758 aaKnown RBP18.42■□□□□ 0.54
VAC14-208ENST00000566655 GRM4Q14833 912 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 OTUD7BQ6GQQ9 843 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 ZSCAN29Q8IWY8 852 aaPredicted RBP18.42■□□□□ 0.54
VAC14-208ENST00000566655 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
VAC14-208ENST00000566655 FBXO18Q8NFZ0 1043 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 CCDC17Q96LX7 622 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 LMBRD1Q9NUN5 540 aa18.42■□□□□ 0.54
VAC14-208ENST00000566655 TOP1P11387 765 aaKnown RBP18.41■□□□□ 0.54
VAC14-208ENST00000566655 JAG1P78504 1218 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
VAC14-208ENST00000566655 SAMD7Q7Z3H4 446 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 CDAN1Q8IWY9 1227 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
VAC14-208ENST00000566655 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 GJB4Q9NTQ9 266 aa18.41■□□□□ 0.54
VAC14-208ENST00000566655 PALM3A6NDB9 673 aaPredicted RBP18.4■□□□□ 0.54
VAC14-208ENST00000566655 H3BQV1 296 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 PKN1Q16512 942 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 SLC35G1Q2M3R5 365 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 IFFO2Q5TF58 517 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 GPC2Q8N158 579 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 SHISA4Q96DD7 197 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 ALG1Q9BT22 464 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
VAC14-208ENST00000566655 MAD2L2Q9UI95 211 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 STX8Q9UNK0 236 aa18.4■□□□□ 0.54
VAC14-208ENST00000566655 ASTN2O75129 1339 aaPredicted RBP18.39■□□□□ 0.53
VAC14-208ENST00000566655 CNTNAP5Q8WYK1 1306 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 PRPF3O43395 683 aaKnown RBP18.39■□□□□ 0.53
VAC14-208ENST00000566655 FOSBP53539 338 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 GUCY1B3Q02153 619 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 FAM173BQ6P4H8 233 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 SIAH1Q8IUQ4 282 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 TMEM87AQ8NBN3 555 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
VAC14-208ENST00000566655 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 TMEM39BQ9GZU3 492 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 VEZTQ9HBM0 779 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 ATP6V1DQ9Y5K8 247 aa18.39■□□□□ 0.53
VAC14-208ENST00000566655 MYO1BO43795 1136 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 TBC1D12O60347 775 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 RBM26Q5T8P6 1007 aaKnown RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 MKL1Q969V6 931 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 GPRC5DQ9NZD1 345 aa18.38■□□□□ 0.53
VAC14-208ENST00000566655 HERC5Q9UII4 1024 aaKnown RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 GREB1LQ9C091 1923 aaPredicted RBP18.38■□□□□ 0.53
VAC14-208ENST00000566655 DEXIO95424 95 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 TTLL1O95922 423 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
VAC14-208ENST00000566655 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 KRT40Q6A162 431 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 RASGRP2Q7LDG7 609 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
VAC14-208ENST00000566655 KIF23Q02241 960 aaPredicted RBP18.36■□□□□ 0.53
VAC14-208ENST00000566655 RASA3Q14644 834 aa18.36■□□□□ 0.53
VAC14-208ENST00000566655 TRIM22Q8IYM9 498 aa18.36■□□□□ 0.53
VAC14-208ENST00000566655 TRPM4Q8TD43 1214 aa18.36■□□□□ 0.53
VAC14-208ENST00000566655 V9GY48 417 aaPredicted RBP18.36■□□□□ 0.53
VAC14-208ENST00000566655 UTRNP46939 3433 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms