RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PLA2G4AP47712 749 aa16.21■□□□□ 0.18
CDH1-209ENST00000566510 RBL2Q08999 1139 aa16.21■□□□□ 0.18
CDH1-209ENST00000566510 CCDC152Q4G0S7 254 aa16.21■□□□□ 0.18
CDH1-209ENST00000566510 IFIT1BQ5T764 474 aaKnown RBP16.21■□□□□ 0.18
CDH1-209ENST00000566510 PLEKHA8P1O95397 391 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 CD44P16070 742 aaKnown RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 ERCC5P28715 1186 aaPredicted RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 CHRNDQ07001 517 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 PAGE5Q96GU1 130 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 RNF26Q9BY78 433 aaPredicted RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 MRFAP1Q9Y605 127 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 A0A1B0GTH6 734 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 CATIPQ7Z7H3 387 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 ENAHQ8N8S7 591 aaPredicted RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 SHISA4Q96DD7 197 aa16.2■□□□□ 0.18
CDH1-209ENST00000566510 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.2■□□□□ 0.18
CDH1-209ENST00000566510 EXOC5O00471 708 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDH1-209ENST00000566510 GYG1P46976 350 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
CDH1-209ENST00000566510 SPATA1Q5VX52 437 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
CDH1-209ENST00000566510 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDH1-209ENST00000566510 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 BCL9O00512 1426 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 WNT7AO00755 349 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 CCT6AP40227 531 aaKnown RBP16.19■□□□□ 0.18
CDH1-209ENST00000566510 FILIP1LQ4L180 1135 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 NID2Q14112 1375 aa16.19■□□□□ 0.18
CDH1-209ENST00000566510 A0A0U1RQJ8 604 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
CDH1-209ENST00000566510 DYNLL1P63167 89 aaKnown RBP16.18■□□□□ 0.18
CDH1-209ENST00000566510 PKN1Q16512 942 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 GPR161Q8N6U8 529 aaKnown RBP16.18■□□□□ 0.18
CDH1-209ENST00000566510 SPATA20Q8TB22 786 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 ATRIPQ8WXE1 791 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 BLZF1Q9H2G9 400 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDH1-209ENST00000566510 SEC23AQ15436 765 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
CDH1-209ENST00000566510 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 CASP14P31944 242 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 RAD9BQ6WBX8 426 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 AK7Q96M32 723 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 PANX2Q96RD6 677 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 PUF60Q9UHX1 559 aaKnown RBP16.17■□□□□ 0.18
CDH1-209ENST00000566510 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 CCDC66A2RUB6 948 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 PTGDRQ13258 359 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 ARFGAP3Q9NP61 516 aa16.17■□□□□ 0.18
CDH1-209ENST00000566510 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
CDH1-209ENST00000566510 MYH8P13535 1937 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 KIF5CO60282 957 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 CC2D1AQ6P1N0 951 aaPredicted RBP16.16■□□□□ 0.18
CDH1-209ENST00000566510 ZCCHC17Q9NP64 241 aaKnown RBP16.16■□□□□ 0.18
CDH1-209ENST00000566510 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 ZNF569Q5MCW4 686 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 CTAGE1Q96RT6 745 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
CDH1-209ENST00000566510 ADGRG1Q9Y653 693 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 TIAM2Q8IVF5 1701 aa16.16■□□□□ 0.18
CDH1-209ENST00000566510 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
CDH1-209ENST00000566510 SASH3O75995 380 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 RCAN1P53805 252 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 DPYDQ12882 1025 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 CUL4BQ13620 913 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 RRAGBQ5VZM2 374 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 FERMT2Q96AC1 680 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 GSDMAQ96QA5 445 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 GNL3LQ9NVN8 582 aaKnown RBP16.15■□□□□ 0.18
CDH1-209ENST00000566510 SLIT2O94813 1529 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 MCM7P33993 719 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
CDH1-209ENST00000566510 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 SLC4A8Q2Y0W8 1093 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 TAF3Q5VWG9 929 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 PIK3AP1Q6ZUJ8 805 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 APTXQ7Z2E3 356 aaKnown RBP16.15■□□□□ 0.18
CDH1-209ENST00000566510 VPS16Q9H269 839 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
CDH1-209ENST00000566510 ARAP2Q8WZ64 1704 aa16.15■□□□□ 0.18
CDH1-209ENST00000566510 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 N4BP3O15049 544 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 NMT2O60551 498 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
CDH1-209ENST00000566510 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 KIF4BQ2VIQ3 1234 aa16.14■□□□□ 0.17
CDH1-209ENST00000566510 RABGGTAQ92696 567 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms