RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 USP17L20D6RJB6 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 USP17L24Q0WX57 530 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 ZYXQ15942 572 aaKnown RBP24.33■■□□□ 1.49
CLN6-207ENST00000566347 U2AF1L4Q8WU68 220 aaKnown RBP24.33■■□□□ 1.49
CLN6-207ENST00000566347 GPATCH3Q96I76 525 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 TXNRD2Q9NNW7 524 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 SWAP70Q9UH65 585 aa24.33■■□□□ 1.49
CLN6-207ENST00000566347 AMOTL1Q8IY63 956 aa24.32■■□□□ 1.48
CLN6-207ENST00000566347 RBPJLQ9UBG7 517 aa24.32■■□□□ 1.48
CLN6-207ENST00000566347 GJD2Q9UKL4 321 aa24.32■■□□□ 1.48
CLN6-207ENST00000566347 SGPL1O95470 568 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 MAPK4P31152 587 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 ERVK-9P63128 1117 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 ERVK-24P63145 666 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 ACER1Q8TDN7 264 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 DDRGK1Q96HY6 314 aa24.31■■□□□ 1.48
CLN6-207ENST00000566347 MPHOSPH10O00566 681 aaKnown RBP24.3■■□□□ 1.48
CLN6-207ENST00000566347 HMGCRP04035 888 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 VCAM1P19320 739 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 GUCY1A2P33402 732 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 SEPT2Q15019 361 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 SLFNL1Q499Z3 407 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 CCAR1Q8IX12 1150 aaKnown RBP24.3■■□□□ 1.48
CLN6-207ENST00000566347 SOCS4Q8WXH5 440 aa24.3■■□□□ 1.48
CLN6-207ENST00000566347 MYH8P13535 1937 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 PRKAB2O43741 272 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 CYP2D6P10635 497 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 EVX2Q03828 476 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 CATSPERGQ6ZRH7 1159 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 NUDT12Q9BQG2 462 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 PAGR1Q9BTK6 254 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 PAK6Q9NQU5 681 aaPredicted RBP24.29■■□□□ 1.48
CLN6-207ENST00000566347 RABGAP1Q9Y3P9 1069 aa24.29■■□□□ 1.48
CLN6-207ENST00000566347 BAZ2AQ9UIF9 1905 aaKnown RBP24.29■■□□□ 1.48
CLN6-207ENST00000566347 PLXNB2O15031 1838 aa24.28■■□□□ 1.48
CLN6-207ENST00000566347 TMEM179Q6ZVK1 233 aa24.28■■□□□ 1.48
CLN6-207ENST00000566347 UBE2Q1Q7Z7E8 422 aa24.28■■□□□ 1.48
CLN6-207ENST00000566347 PEX10O60683 326 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 CCNA1P78396 465 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 Q3C1V9 767 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 DEFB118Q96PH6 123 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 HTATIP2Q9BUP3 242 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 SLC4A4Q9Y6R1 1079 aa24.27■■□□□ 1.48
CLN6-207ENST00000566347 FARP2O94887 1054 aaPredicted RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 TFRCP02786 760 aaKnown RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 CHGBP05060 677 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 XRCC5P13010 732 aaKnown RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 C12orf60Q5U649 245 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 LBX2Q6XYB7 198 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 TRMT44Q8IYL2 757 aaKnown RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 SLC44A5Q8NCS7 719 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 DYNLL2Q96FJ2 89 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.26■■□□□ 1.474e-8■■■■□ 25.2
CLN6-207ENST00000566347 PUS7LQ9H0K6 701 aaKnown RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 RPAP3Q9H6T3 665 aaPredicted RBP24.26■■□□□ 1.47
CLN6-207ENST00000566347 CEP290O15078 2479 aa24.26■■□□□ 1.47
CLN6-207ENST00000566347 USP17L12C9JPN9 530 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 USP17L21D6R901 530 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 CYP2B6P20813 491 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 POTEEQ6S8J3 1075 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 GPR142Q7Z601 462 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 PLEKHH3Q7Z736 793 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 KBTBD3Q8NAB2 608 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 CCDC17Q96LX7 622 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 PORCNQ9H237 461 aa24.25■■□□□ 1.47
CLN6-207ENST00000566347 CWC22Q9HCG8 908 aaKnown RBP24.25■■□□□ 1.47
CLN6-207ENST00000566347 A0A1W2PRG0 241 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 RRP1P56182 461 aaKnown RBP24.24■■□□□ 1.47
CLN6-207ENST00000566347 C16orf86Q6ZW13 317 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 DPF3Q92784 378 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 CRISPLD2Q9H0B8 497 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 SH2D4AQ9H788 454 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 ARHGEF10LQ9HCE6 1279 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 HMX1Q9NP08 348 aaPredicted RBP24.24■■□□□ 1.47
CLN6-207ENST00000566347 RPTORQ8N122 1335 aa24.24■■□□□ 1.47
CLN6-207ENST00000566347 CNMDO75829 334 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 GLRX3O76003 335 aaKnown RBP24.23■■□□□ 1.47
CLN6-207ENST00000566347 RGS2P41220 211 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 CDK8P49336 464 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 TRIB2Q92519 343 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 USP6NLQ92738 828 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 ARPP21Q9UBL0 812 aaPredicted RBP24.23■■□□□ 1.47
CLN6-207ENST00000566347 PCDHB15Q9Y5E8 787 aa24.23■■□□□ 1.47
CLN6-207ENST00000566347 TTC41PQ6P2S7 1318 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 CYP2D7A0A087X1C5 515 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 SPDYE16A6NNV3 312 aaPredicted RBP24.22■■□□□ 1.47
CLN6-207ENST00000566347 ZFYP08048 801 aaPredicted RBP24.22■■□□□ 1.47
CLN6-207ENST00000566347 AKR1B1P15121 316 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 ICA1Q05084 483 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 LRRFIP1Q32MZ4 808 aaKnown RBP24.22■■□□□ 1.47
CLN6-207ENST00000566347 MORN1Q5T089 497 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 CTR9Q6PD62 1173 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 LPAR1Q92633 364 aa24.22■■□□□ 1.47
CLN6-207ENST00000566347 STRBPQ96SI9 672 aaKnown RBP24.22■■□□□ 1.47
CLN6-207ENST00000566347 H0YGN5 161 aa24.21■■□□□ 1.47
CLN6-207ENST00000566347 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
CLN6-207ENST00000566347 COG2Q14746 738 aa24.21■■□□□ 1.47
CLN6-207ENST00000566347 TSHZ3Q63HK5 1081 aa24.21■■□□□ 1.47
CLN6-207ENST00000566347 APPBP2Q92624 585 aa24.21■■□□□ 1.47
CLN6-207ENST00000566347 APBA2Q99767 749 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms