RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MBD4O95243 580 aa22.14■■□□□ 1.13
USB1-213ENST00000566292 SGPL1O95470 568 aa22.14■■□□□ 1.13
USB1-213ENST00000566292 Q3C1V9 767 aa22.14■■□□□ 1.13
USB1-213ENST00000566292 GCC1Q96CN9 775 aa22.14■■□□□ 1.13
USB1-213ENST00000566292 CABP5Q9NP86 173 aa22.14■■□□□ 1.13
USB1-213ENST00000566292 USP14P54578 494 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 ERVK-9P63128 1117 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 ERVK-24P63145 666 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 SEPT2Q15019 361 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 SLC44A5Q8NCS7 719 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 PAGR1Q9BTK6 254 aa22.13■■□□□ 1.13
USB1-213ENST00000566292 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.13■■□□□ 1.13
USB1-213ENST00000566292 PAK6Q9NQU5 681 aaPredicted RBP22.13■■□□□ 1.13
USB1-213ENST00000566292 USP17L15C9J2P7 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L13C9JLJ4 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L11C9JVI0 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L18D6R9N7 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L22D6RA61 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L17D6RBQ6 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L19D6RCP7 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L20D6RJB6 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 VCAM1P19320 739 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 USP17L24Q0WX57 530 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 GTF3C2Q8WUA4 911 aaPredicted RBP22.12■■□□□ 1.13
USB1-213ENST00000566292 DEFB118Q96PH6 123 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 PORCNQ9H237 461 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
USB1-213ENST00000566292 SMIM22K7EJ46 135 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 HMGCRP04035 888 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 TRIM32Q13049 653 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 UBE3CQ15386 1083 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 CATSPERGQ6ZRH7 1159 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 ATP8A2Q9NTI2 1148 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 RLFQ13129 1914 aa22.11■■□□□ 1.13
USB1-213ENST00000566292 CNMDO75829 334 aa22.1■■□□□ 1.13
USB1-213ENST00000566292 FARP2O94887 1054 aaPredicted RBP22.1■■□□□ 1.13
USB1-213ENST00000566292 CYP2B6P20813 491 aa22.1■■□□□ 1.13
USB1-213ENST00000566292 HABP4Q5JVS0 413 aaKnown RBP22.1■■□□□ 1.13
USB1-213ENST00000566292 TRIB2Q92519 343 aa22.1■■□□□ 1.13
USB1-213ENST00000566292 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.1■■□□□ 1.13
USB1-213ENST00000566292 ALPK3Q96L96 1907 aa22.1■■□□□ 1.13
USB1-213ENST00000566292 CYP2D7A0A087X1C5 515 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 A0A1W2PRG0 241 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 H0YGN5 161 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 MPHOSPH10O00566 681 aaKnown RBP22.09■■□□□ 1.13
USB1-213ENST00000566292 MAPK4P31152 587 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 NUDT12Q9BQG2 462 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 CRISPLD2Q9H0B8 497 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 PUS7LQ9H0K6 701 aaKnown RBP22.09■■□□□ 1.13
USB1-213ENST00000566292 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 SWAP70Q9UH65 585 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 RABGAP1Q9Y3P9 1069 aa22.09■■□□□ 1.13
USB1-213ENST00000566292 TFRCP02786 760 aaKnown RBP22.08■■□□□ 1.13
USB1-213ENST00000566292 GPR142Q7Z601 462 aa22.08■■□□□ 1.13
USB1-213ENST00000566292 SOCS4Q8WXH5 440 aa22.08■■□□□ 1.13
USB1-213ENST00000566292 USP6NLQ92738 828 aa22.08■■□□□ 1.13
USB1-213ENST00000566292 RPAP3Q9H6T3 665 aaPredicted RBP22.08■■□□□ 1.13
USB1-213ENST00000566292 PARP14Q460N5 1801 aa22.08■■□□□ 1.12
USB1-213ENST00000566292 C12orf60Q5U649 245 aa22.07■■□□□ 1.12
USB1-213ENST00000566292 TSHZ3Q63HK5 1081 aa22.07■■□□□ 1.12
USB1-213ENST00000566292 LBX2Q6XYB7 198 aa22.07■■□□□ 1.12
USB1-213ENST00000566292 TMEM179Q6ZVK1 233 aa22.07■■□□□ 1.12
USB1-213ENST00000566292 DPF3Q92784 378 aa22.07■■□□□ 1.12
USB1-213ENST00000566292 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 A0A0G2JMZ2 1700 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 SPDYE16A6NNV3 312 aaPredicted RBP22.06■■□□□ 1.12
USB1-213ENST00000566292 USP17L12C9JPN9 530 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 USP17L21D6R901 530 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 XRCC5P13010 732 aaKnown RBP22.06■■□□□ 1.12
USB1-213ENST00000566292 AKR1B1P15121 316 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 MORN1Q5T089 497 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 ZSCAN25Q6NSZ9 544 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 PLEKHH3Q7Z736 793 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 CLEC10AQ8IUN9 316 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 HTATIP2Q9BUP3 242 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 BTBD7Q9P203 1132 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 PCDHB15Q9Y5E8 787 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 SLC4A4Q9Y6R1 1079 aa22.06■■□□□ 1.12
USB1-213ENST00000566292 CAPN2P17655 700 aa22.05■■□□□ 1.12
USB1-213ENST00000566292 CDK8P49336 464 aa22.05■■□□□ 1.12
USB1-213ENST00000566292 KIAA1755Q5JYT7 1200 aa22.05■■□□□ 1.12
USB1-213ENST00000566292 MAP3K21Q5TCX8 1036 aa22.05■■□□□ 1.12
USB1-213ENST00000566292 SIAH1Q8IUQ4 282 aa22.05■■□□□ 1.12
USB1-213ENST00000566292 CCAR1Q8IX12 1150 aaKnown RBP22.05■■□□□ 1.12
USB1-213ENST00000566292 HMX1Q9NP08 348 aaPredicted RBP22.05■■□□□ 1.12
USB1-213ENST00000566292 COLQQ9Y215 455 aaPredicted RBP22.05■■□□□ 1.12
USB1-213ENST00000566292 CCL14Q16627 93 aa22.04■■□□□ 1.12
USB1-213ENST00000566292 C16orf86Q6ZW13 317 aa22.04■■□□□ 1.12
USB1-213ENST00000566292 KBTBD3Q8NAB2 608 aa22.04■■□□□ 1.12
USB1-213ENST00000566292 GREB1LQ9C091 1923 aaPredicted RBP22.04■■□□□ 1.12
USB1-213ENST00000566292 TRIOBPQ9H2D6 2365 aa22.03■■□□□ 1.12
USB1-213ENST00000566292 RGS2P41220 211 aa22.03■■□□□ 1.12
USB1-213ENST00000566292 CCNA1P78396 465 aa22.03■■□□□ 1.12
USB1-213ENST00000566292 CTR9Q6PD62 1173 aa22.03■■□□□ 1.12
USB1-213ENST00000566292 DIS3LQ8TF46 1054 aaKnown RBP22.03■■□□□ 1.12
USB1-213ENST00000566292 STRBPQ96SI9 672 aaKnown RBP22.03■■□□□ 1.12
USB1-213ENST00000566292 FRMPD3Q5JV73 1810 aa22.03■■□□□ 1.12
USB1-213ENST00000566292 PRKAR2AP13861 404 aaKnown RBP22.02■■□□□ 1.12
USB1-213ENST00000566292 ZKSCAN1P17029 563 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms