RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 FAM169BQ8N8A8 192 aa8.78□□□□□ -1
KARS-206ENST00000566249 RIN3Q8TB24 985 aa8.78□□□□□ -1
KARS-206ENST00000566249 SHKBP1Q8TBC3 707 aa8.78□□□□□ -1
KARS-206ENST00000566249 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
KARS-206ENST00000566249 ZNF408Q9H9D4 720 aa8.78□□□□□ -1
KARS-206ENST00000566249 CUX2O14529 1486 aa8.77□□□□□ -1
KARS-206ENST00000566249 TNFRSF10CO14798 259 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 RGS13O14921 159 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 GUCY2CP25092 1073 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -1.01
KARS-206ENST00000566249 CYP27A1Q02318 531 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 ZNF765Q7L2R6 523 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 CDH24Q86UP0 819 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 DRC1Q96MC2 740 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 SLC9A7Q96T83 725 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 SEMA6BQ9H3T3 888 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 ATG3Q9NT62 314 aa8.77□□□□□ -1.01
KARS-206ENST00000566249 FAM86C2PA6NEL3 165 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 SMAD7O15105 426 aaKnown RBP8.76□□□□□ -1.01
KARS-206ENST00000566249 STK10O94804 968 aaKnown RBP8.76□□□□□ -1.01
KARS-206ENST00000566249 EOMESO95936 686 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 ACRP10323 421 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 PPP2R5EQ16537 467 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 INTS3Q68E01 1043 aaKnown RBP8.76□□□□□ -1.01
KARS-206ENST00000566249 TAB3Q8N5C8 712 aaPredicted RBP8.76□□□□□ -1.01
KARS-206ENST00000566249 DNAJB8Q8NHS0 232 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 TPX2Q9ULW0 747 aaKnown RBP8.76□□□□□ -1.01
KARS-206ENST00000566249 CEP131Q9UPN4 1083 aa8.76□□□□□ -1.01
KARS-206ENST00000566249 EIF4G1Q04637 1599 aaKnown RBP8.75□□□□□ -1.01
KARS-206ENST00000566249 UBOX5O94941 541 aa8.75□□□□□ -1.01
KARS-206ENST00000566249 METTL22Q9BUU2 404 aaPredicted RBP8.75□□□□□ -1.01
KARS-206ENST00000566249 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
KARS-206ENST00000566249 ETV3P41162 512 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 TNNI3KQ59H18 835 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 PRSS36Q5K4E3 855 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 ZNF746Q6NUN9 644 aaPredicted RBP8.74□□□□□ -1.01
KARS-206ENST00000566249 TTC6Q86TZ1 520 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
KARS-206ENST00000566249 C19orf47Q8N9M1 422 aaKnown RBP8.74□□□□□ -1.01
KARS-206ENST00000566249 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
KARS-206ENST00000566249 A0A1W2PQH9 124 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 CCNFP41002 786 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 ZYXQ15942 572 aaKnown RBP8.73□□□□□ -1.01
KARS-206ENST00000566249 UNC5AQ6ZN44 842 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 ZDHHC13Q8IUH4 622 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 USP35Q9P2H5 1018 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 GTF2IRD1Q9UHL9 959 aa8.73□□□□□ -1.01
KARS-206ENST00000566249 CYP7A1P22680 504 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 CASP7P55210 303 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 ANKS3Q6ZW76 656 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 FAM214BQ7L5A3 538 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 TMEM192Q8IY95 271 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 HEXIM2Q96MH2 286 aaKnown RBP8.72□□□□□ -1.01
KARS-206ENST00000566249 SLC6A18Q96N87 628 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.72□□□□□ -1.01
KARS-206ENST00000566249 TNKS2Q9H2K2 1166 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 ACTR10Q9NZ32 417 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 R3HCC1Q9Y3T6 440 aaKnown RBP8.72□□□□□ -1.01
KARS-206ENST00000566249 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
KARS-206ENST00000566249 CLEC3AO75596 197 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 CPSF6Q16630 551 aaKnown RBP eCLIP8.71□□□□□ -1.02
KARS-206ENST00000566249 SFRP5Q5T4F7 317 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 CKAP2LQ8IYA6 745 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 HNRNPLLQ8WVV9 542 aaKnown RBP8.71□□□□□ -1.02
KARS-206ENST00000566249 KREMEN1Q96MU8 473 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 LRRC4CQ9HCJ2 640 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 CNTNAP4Q9C0A0 1308 aa8.71□□□□□ -1.02
KARS-206ENST00000566249 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 UBXN4Q92575 508 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 DHRS1Q96LJ7 313 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 HIRIP3Q9BW71 556 aaPredicted RBP8.7□□□□□ -1.02
KARS-206ENST00000566249 PIM2Q9P1W9 311 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 LTBP3Q9NS15 1303 aa8.7□□□□□ -1.02
KARS-206ENST00000566249 PRR19A6NJB7 356 aa8.69□□□□□ -1.02
KARS-206ENST00000566249 RBAK-RBAKDNI3L0D1 243 aa8.69□□□□□ -1.02
KARS-206ENST00000566249 K7ELQ4 463 aaPredicted RBP8.69□□□□□ -1.02
KARS-206ENST00000566249 IGF2BP3O00425 579 aaKnown RBP eCLIP8.69□□□□□ -1.02
KARS-206ENST00000566249 CBX7O95931 251 aa8.69□□□□□ -1.02
KARS-206ENST00000566249 FAM181AQ8N9Y4 354 aa8.69□□□□□ -1.02
KARS-206ENST00000566249 RNF141Q8WVD5 230 aa8.69□□□□□ -1.02
KARS-206ENST00000566249 ZNF512BQ96KM6 892 aaPredicted RBP8.69□□□□□ -1.02
KARS-206ENST00000566249 DNAJC2Q99543 621 aaKnown RBP8.69□□□□□ -1.02
KARS-206ENST00000566249 GNAT3A8MTJ3 354 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 CYP26A1O43174 497 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 TGFB1P01137 390 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 RNF4P78317 190 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 LARP1BQ659C4 914 aaKnown RBP8.68□□□□□ -1.02
KARS-206ENST00000566249 COX4I2Q96KJ9 171 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 SUCOQ9UBS9 1254 aaKnown RBP8.68□□□□□ -1.02
KARS-206ENST00000566249 PCDHB10Q9UN67 800 aa8.68□□□□□ -1.02
KARS-206ENST00000566249 COL17A1Q9UMD9 1497 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 381 ms