RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 CPA4Q9UI42 421 aa21.59■■□□□ 1.05
TRADD-205ENST00000566247 ROBO3Q96MS0 1386 aa21.59■■□□□ 1.05
TRADD-205ENST00000566247 CCDC171Q6TFL3 1326 aa21.58■■□□□ 1.05
TRADD-205ENST00000566247 GUCY1A2P33402 732 aa21.58■■□□□ 1.05
TRADD-205ENST00000566247 VPS53Q5VIR6 699 aa21.58■■□□□ 1.05
TRADD-205ENST00000566247 CWC27Q6UX04 472 aaKnown RBP21.58■■□□□ 1.05
TRADD-205ENST00000566247 CD99L2Q8TCZ2 262 aa21.58■■□□□ 1.05
TRADD-205ENST00000566247 MCOLN1Q9GZU1 580 aa21.58■■□□□ 1.05
TRADD-205ENST00000566247 PTPRFP10586 1907 aa21.58■■□□□ 1.04
TRADD-205ENST00000566247 OSBPP22059 807 aa21.57■■□□□ 1.04
TRADD-205ENST00000566247 USP14P54578 494 aa21.57■■□□□ 1.04
TRADD-205ENST00000566247 PPARAQ07869 468 aa21.57■■□□□ 1.04
TRADD-205ENST00000566247 KIF22Q14807 665 aa21.57■■□□□ 1.04
TRADD-205ENST00000566247 ZNF589Q86UQ0 364 aaPredicted RBP21.57■■□□□ 1.04
TRADD-205ENST00000566247 ACER1Q8TDN7 264 aa21.57■■□□□ 1.04
TRADD-205ENST00000566247 LOC285556D6RIA3 1793 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 IRX3P78415 501 aaPredicted RBP21.56■■□□□ 1.04
TRADD-205ENST00000566247 ICA1Q05084 483 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 PDE4BQ07343 736 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 ARHGEF6Q15052 776 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 KIAA1683Q9H0B3 1180 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 ARHGEF10LQ9HCE6 1279 aa21.56■■□□□ 1.04
TRADD-205ENST00000566247 FOXP2O15409 715 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 RASA1P20936 1047 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 C17orf99Q6UX52 265 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
TRADD-205ENST00000566247 EMILIN3Q9NT22 766 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 TRIM17Q9Y577 477 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 MYH8P13535 1937 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 ADGRA2Q96PE1 1338 aa21.55■■□□□ 1.04
TRADD-205ENST00000566247 PRDM1O75626 825 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 HSPD1P10809 573 aaKnown RBP21.54■■□□□ 1.04
TRADD-205ENST00000566247 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 ALX1Q15699 326 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 PKN2Q16513 984 aaKnown RBP21.54■■□□□ 1.04
TRADD-205ENST00000566247 CLEC10AQ8IUN9 316 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 ASCC2Q9H1I8 757 aaPredicted RBP21.54■■□□□ 1.04
TRADD-205ENST00000566247 SH2D4AQ9H788 454 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 EFCC1Q9HA90 598 aa21.54■■□□□ 1.04
TRADD-205ENST00000566247 ECM2O94769 699 aaPredicted RBP21.53■■□□□ 1.04
TRADD-205ENST00000566247 C12orf42Q96LP6 360 aa21.53■■□□□ 1.04
TRADD-205ENST00000566247 KANSL2Q9H9L4 492 aa21.53■■□□□ 1.04
TRADD-205ENST00000566247 LACTBP83111 547 aaPredicted RBP21.52■■□□□ 1.04
TRADD-205ENST00000566247 CTDSPL2Q05D32 466 aa21.52■■□□□ 1.04
TRADD-205ENST00000566247 OTOP1Q7RTM1 612 aa21.52■■□□□ 1.04
TRADD-205ENST00000566247 ABHD8Q96I13 439 aa21.52■■□□□ 1.04
TRADD-205ENST00000566247 A0A1W2PRG0 241 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 FGAP02671 866 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 BCRP11274 1271 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 VCAM1P19320 739 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
TRADD-205ENST00000566247 ANKRD13CQ8N6S4 541 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 RUFY2Q8WXA3 655 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 ZMYM6O95789 1325 aa21.51■■□□□ 1.03
TRADD-205ENST00000566247 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 TSPY3P0CV98 308 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 TSPY8P0CW00 308 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 EEF2P13639 858 aaKnown RBP21.5■■□□□ 1.03
TRADD-205ENST00000566247 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
TRADD-205ENST00000566247 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 FBXO46Q6PJ61 603 aaPredicted RBP21.5■■□□□ 1.03
TRADD-205ENST00000566247 ARHGAP39Q9C0H5 1083 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 ANAPC4Q9UJX5 808 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 TMX2Q9Y320 296 aa21.5■■□□□ 1.03
TRADD-205ENST00000566247 RAD21O60216 631 aa21.49■■□□□ 1.03
TRADD-205ENST00000566247 CAPN15O75808 1086 aa21.49■■□□□ 1.03
TRADD-205ENST00000566247 FMNL1O95466 1100 aaPredicted RBP21.49■■□□□ 1.03
TRADD-205ENST00000566247 PSMC4P43686 418 aa21.49■■□□□ 1.03
TRADD-205ENST00000566247 RPAP3Q9H6T3 665 aaPredicted RBP21.49■■□□□ 1.03
TRADD-205ENST00000566247 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
TRADD-205ENST00000566247 RAD50Q92878 1312 aa21.49■■□□□ 1.03
TRADD-205ENST00000566247 CHMLP26374 656 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 HAND2P61296 217 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 HERVK_113P62684 666 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 FAM47AQ5JRC9 791 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 SIAH1Q8IUQ4 282 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
TRADD-205ENST00000566247 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRADD-205ENST00000566247 VCPKMTQ9H867 229 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 GOPCQ9HD26 462 aa21.48■■□□□ 1.03
TRADD-205ENST00000566247 TSPY2A6NKD2 308 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 FCGRTP55899 365 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 TFAP4Q01664 338 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 FAM110CQ1W6H9 321 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 IFFO2Q5TF58 517 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 SPICE1Q8N0Z3 855 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 GTF3C2Q8WUA4 911 aaPredicted RBP21.47■■□□□ 1.03
TRADD-205ENST00000566247 LPAR1Q92633 364 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 DSCC1Q9BVC3 393 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 TANGO6Q9C0B7 1094 aa21.47■■□□□ 1.03
TRADD-205ENST00000566247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.47■■□□□ 1.03
TRADD-205ENST00000566247 ZNF213O14771 459 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms