RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L15C9J2P7 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L13C9JLJ4 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L11C9JVI0 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L18D6R9N7 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L22D6RA61 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L17D6RBQ6 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L19D6RCP7 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L20D6RJB6 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 POTEB2H3BUK9 544 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 HLA-DOAP06340 250 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 CYP7A1P22680 504 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 USP17L24Q0WX57 530 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 CLUAP1Q96AJ1 413 aa16.36■□□□□ 0.21
COMMD4-214ENST00000566230 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 IGHA2P01877 340 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 PTPREP23469 700 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-214ENST00000566230 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-214ENST00000566230 BTBD7Q9P203 1132 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 RLFQ13129 1914 aa16.35■□□□□ 0.21
COMMD4-214ENST00000566230 LTBP2Q14767 1821 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 IGSF3O75054 1194 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 HOXC6P09630 235 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 CCNA1P78396 465 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 TRPV1Q8NER1 839 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 NPLOC4Q8TAT6 608 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 GUCD1Q96NT3 240 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 FEZ1Q99689 392 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 KIAA1683Q9H0B3 1180 aa16.34■□□□□ 0.21
COMMD4-214ENST00000566230 CWC22Q9HCG8 908 aaKnown RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 TLR7Q9NYK1 1049 aaKnown RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 DBNLQ9UJU6 430 aaKnown RBP16.34■□□□□ 0.21
COMMD4-214ENST00000566230 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
COMMD4-214ENST00000566230 VCAM1P19320 739 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 GRB14Q14449 540 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 LPAR1Q92633 364 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-214ENST00000566230 EHD4Q9H223 541 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 SERPINB13Q9UIV8 391 aa16.33■□□□□ 0.2
COMMD4-214ENST00000566230 SPDYE16A6NNV3 312 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 CNGA1P29973 690 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 CYP2C19P33261 490 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 GUCY1A2P33402 732 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 USP5P45974 858 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 USP14P54578 494 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 ATP2B2Q01814 1243 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
COMMD4-214ENST00000566230 LBHD1Q9BQE6 289 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
COMMD4-214ENST00000566230 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
COMMD4-214ENST00000566230 SHMT1P34896 483 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 PLCD1P51178 756 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 CERKLQ49MI3 558 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-214ENST00000566230 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 EAF2Q96CJ1 260 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-214ENST00000566230 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
COMMD4-214ENST00000566230 DNM1LO00429 736 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 MSCO60682 206 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 MS4A1P11836 297 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 CYBAP13498 195 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 RTP1P59025 263 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD4-214ENST00000566230 RPAP3Q9H6T3 665 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-214ENST00000566230 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 IVNS1ABPQ9Y6Y0 642 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
COMMD4-214ENST00000566230 EVX2Q03828 476 aa16.29■□□□□ 0.2
COMMD4-214ENST00000566230 SEPT2Q15019 361 aa16.29■□□□□ 0.2
COMMD4-214ENST00000566230 GJC2Q5T442 439 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-214ENST00000566230 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
COMMD4-214ENST00000566230 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
COMMD4-214ENST00000566230 A0A1W2PRG0 241 aa16.28■□□□□ 0.2
COMMD4-214ENST00000566230 RIOK1Q9BRS2 568 aaKnown RBP16.28■□□□□ 0.2
COMMD4-214ENST00000566230 MOV10L1Q9BXT6 1211 aaKnown RBP16.28■□□□□ 0.2
COMMD4-214ENST00000566230 CABP5Q9NP86 173 aa16.28■□□□□ 0.2
COMMD4-214ENST00000566230 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
COMMD4-214ENST00000566230 EYSQ5T1H1 3165 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms