RNA–Protein interactions for RNA: ENST00000566024.1

CYLD-209, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-209ENST00000566024 C19orf44Q9H6X5 657 aa6.64□□□□□ -1.35
CYLD-209ENST00000566024 RC3H2Q9HBD1 1191 aaKnown RBP6.64□□□□□ -1.35
CYLD-209ENST00000566024 ADGRF5Q8IZF2 1346 aa6.64□□□□□ -1.35
CYLD-209ENST00000566024 METP08581 1390 aa6.64□□□□□ -1.35
CYLD-209ENST00000566024 CHD2O14647 1828 aaKnown RBP6.64□□□□□ -1.35
CYLD-209ENST00000566024 PPLO60437 1756 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 HNRNPUQ00839 825 aaKnown RBP eCLIP6.63□□□□□ -1.35
CYLD-209ENST00000566024 FKBP4Q02790 459 aaKnown RBP eCLIP6.63□□□□□ -1.35
CYLD-209ENST00000566024 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
CYLD-209ENST00000566024 PKN1Q16512 942 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 MKNK2Q9HBH9 465 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 CCDC87Q9NVE4 849 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 POGKQ9P215 609 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 VAV3Q9UKW4 847 aa6.63□□□□□ -1.35
CYLD-209ENST00000566024 ALKQ9UM73 1620 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 NCOA3Q9Y6Q9 1424 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 DHX57Q6P158 1386 aaKnown RBP6.62□□□□□ -1.35
CYLD-209ENST00000566024 TMEM88BA6NKF7 163 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 TMPRSS2O15393 492 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 NEFLP07196 543 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 CD8BP10966 210 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 PDIA4P13667 645 aaKnown RBP6.62□□□□□ -1.35
CYLD-209ENST00000566024 ZEB1P37275 1124 aaPredicted RBP6.62□□□□□ -1.35
CYLD-209ENST00000566024 PRKCQQ04759 706 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 BNIP3Q12983 259 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 FBLN7Q53RD9 439 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 MEX3CQ5U5Q3 659 aaKnown RBP6.62□□□□□ -1.35
CYLD-209ENST00000566024 TMEM132EQ6IEE7 984 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 SPOCD1Q6ZMY3 1216 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 PLD6Q8N2A8 252 aaKnown RBP6.62□□□□□ -1.35
CYLD-209ENST00000566024 ATXN3LQ9H3M9 355 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
CYLD-209ENST00000566024 NRXN3Q9Y4C0 1643 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 PTPRUQ92729 1446 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 RNASE1P07998 156 aaKnown RBP6.61□□□□□ -1.35
CYLD-209ENST00000566024 FAM87AP0C7U9 286 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 PDE4CQ08493 712 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 SAFB2Q14151 953 aaKnown RBP eCLIP6.61□□□□□ -1.35
CYLD-209ENST00000566024 ZNF124Q15973 351 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 IFI16Q16666 785 aaKnown RBP6.61□□□□□ -1.35
CYLD-209ENST00000566024 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 PIDD1Q9HB75 910 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
CYLD-209ENST00000566024 CRIM1Q9NZV1 1036 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 XIRP1Q702N8 1843 aaKnown RBP6.61□□□□□ -1.35
CYLD-209ENST00000566024 ROBO1Q9Y6N7 1651 aa6.61□□□□□ -1.35
CYLD-209ENST00000566024 FAM135BQ49AJ0 1406 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 ADGRL3Q9HAR2 1447 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 RPS26P11Q5JNZ5 115 aaPredicted RBP6.6□□□□□ -1.35
CYLD-209ENST00000566024 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 BHLHE22Q8NFJ8 381 aaPredicted RBP6.6□□□□□ -1.35
CYLD-209ENST00000566024 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 SLC38A3Q99624 504 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 LGR6Q9HBX8 967 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 MYOM2P54296 1465 aa6.6□□□□□ -1.35
CYLD-209ENST00000566024 PTCH1Q13635 1447 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.35
CYLD-209ENST00000566024 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.59□□□□□ -1.35
CYLD-209ENST00000566024 ROBO2Q9HCK4 1378 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 ID3Q02535 119 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 CDK5R2Q13319 367 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 WAPLQ7Z5K2 1190 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 FAM181AQ8N9Y4 354 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 LRRN4CLQ8ND94 238 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 HRASLS5Q96KN8 279 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 EHD4Q9H223 541 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 ADAMTS6Q9UKP5 1117 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 TRAK1Q9UPV9 953 aa6.59□□□□□ -1.35
CYLD-209ENST00000566024 PHLPP1O60346 1717 aa6.59□□□□□ -1.36
CYLD-209ENST00000566024 PIK3C2GO75747 1445 aa6.59□□□□□ -1.36
CYLD-209ENST00000566024 DCCP43146 1447 aa6.59□□□□□ -1.36
CYLD-209ENST00000566024 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.36
CYLD-209ENST00000566024 LRPPRCP42704 1394 aaKnown RBP6.58□□□□□ -1.36
CYLD-209ENST00000566024 LAMC1P11047 1609 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 CEACAM5P06731 702 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 SLFN14P0C7P3 912 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 PRPF40BQ6NWY9 871 aaKnown RBP6.58□□□□□ -1.36
CYLD-209ENST00000566024 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
CYLD-209ENST00000566024 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 C14orf93Q9H972 538 aaKnown RBP6.58□□□□□ -1.36
CYLD-209ENST00000566024 KRT82Q9NSB4 513 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 USTQ9Y2C2 406 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 IFT172Q9UG01 1749 aa6.58□□□□□ -1.36
CYLD-209ENST00000566024 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 TMEM265A0A087WTH1 108 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 ABL1P00519 1130 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 KIF4BQ2VIQ3 1234 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 ANGEL2Q5VTE6 544 aaKnown RBP6.57□□□□□ -1.36
CYLD-209ENST00000566024 USPL1Q5W0Q7 1092 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 BRINP3Q76B58 766 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 FLAD1Q8NFF5 587 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 KRTAP4-2Q9BYR5 136 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 CCDC86Q9H6F5 360 aaKnown RBP6.57□□□□□ -1.36
CYLD-209ENST00000566024 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
CYLD-209ENST00000566024 EGFL7Q9UHF1 273 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms