RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MYH4Q9Y623 1939 aa25.03■■□□□ 1.6
SHCBP1-205ENST00000566016 HMGCS2P54868 508 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 GPAT2Q6NUI2 795 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 CTNNA3Q9UI47 895 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 AGTPBP1Q9UPW5 1226 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 CASP8AP2Q9UKL3 1982 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 C12orf42Q96LP6 360 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 KANSL2Q9H9L4 492 aa25.02■■□□□ 1.6
SHCBP1-205ENST00000566016 ORC4O43929 436 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 CDC45O75419 566 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 NT5C2P49902 561 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 USP14P54578 494 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 ICA1Q05084 483 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 CTDSPL2Q05D32 466 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 GADL1Q6ZQY3 521 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 ZNF444Q8N0Y2 327 aaPredicted RBP25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 ESYT1Q9BSJ8 1104 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 PRDM10Q9NQV6 1147 aa25.01■■□□□ 1.59
SHCBP1-205ENST00000566016 PDHXO00330 501 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 PRDM1O75626 825 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 CRHR2Q13324 411 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 TAF1CQ15572 869 aaPredicted RBP25■■□□□ 1.59
SHCBP1-205ENST00000566016 CASC1Q6TDU7 716 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 FEZ1Q99689 392 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 TSKSQ9UJT2 592 aa25■■□□□ 1.59
SHCBP1-205ENST00000566016 LBX1P52954 281 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 USP17L2Q6R6M4 530 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 STAG1Q8WVM7 1258 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 NBPF3Q9H094 633 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 RNF41Q9H4P4 317 aaPredicted RBP24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 SH2D4AQ9H788 454 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 ZFYVE28Q9HCC9 887 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 ARHGEF10LQ9HCE6 1279 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 TMOD4Q9NZQ9 345 aa24.99■■□□□ 1.59
SHCBP1-205ENST00000566016 IGKV6D-41A0A0C4DH26 115 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 ZNF213O14771 459 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 TBC1D8O95759 1140 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 PABPC4Q13310 644 aaKnown RBP eCLIP24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 IMMTQ16891 758 aaKnown RBP24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 AKNAD1Q5T1N1 836 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 NEDD1Q8NHV4 660 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 ACER1Q8TDN7 264 aa24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 PARK7Q99497 189 aaKnown RBP24.98■■□□□ 1.59
SHCBP1-205ENST00000566016 HAND2P61296 217 aa24.97■■□□□ 1.59
SHCBP1-205ENST00000566016 SIAH1Q8IUQ4 282 aa24.97■■□□□ 1.59
SHCBP1-205ENST00000566016 TMX2Q9Y320 296 aa24.97■■□□□ 1.59
SHCBP1-205ENST00000566016 U3KPZ7 1027 aaPredicted RBP24.97■■□□□ 1.59
SHCBP1-205ENST00000566016 A0A1W2PRG0 241 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TLR2O60603 784 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TSPY3P0CV98 308 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TSPY8P0CW00 308 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TREML2Q5T2D2 321 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 MAP4K1Q92918 833 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 EMILIN3Q9NT22 766 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 PNMA3Q9UL41 463 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 SYNPO2Q9UMS6 1093 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TACC3Q9Y6A5 838 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 HOXA7P31268 230 aaPredicted RBP24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 PTH1RQ03431 593 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 PPP4R3BQ5MIZ7 849 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 MFSD6Q6ZSS7 791 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 KIAA1211Q6ZU35 1233 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 CLEC10AQ8IUN9 316 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 TBC1D10CQ8IV04 446 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 R3HDMLQ9H3Y0 253 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 NYAP2Q9P242 653 aa24.96■■□□□ 1.59
SHCBP1-205ENST00000566016 ADGRA2Q96PE1 1338 aa24.95■■□□□ 1.59
SHCBP1-205ENST00000566016 GPR25O00155 361 aa24.95■■□□□ 1.58
SHCBP1-205ENST00000566016 TFAP4Q01664 338 aa24.95■■□□□ 1.58
SHCBP1-205ENST00000566016 LPAR1Q92633 364 aa24.95■■□□□ 1.58
SHCBP1-205ENST00000566016 PARP14Q460N5 1801 aa24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 TSPY2A6NKD2 308 aa24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 EEF2P13639 858 aaKnown RBP24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 DGKZQ13574 1117 aa24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 CEP95Q96GE4 821 aa24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 LSG1Q9H089 658 aaKnown RBP24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 MTMR4Q9NYA4 1195 aa24.94■■□□□ 1.58
SHCBP1-205ENST00000566016 VCAM1P19320 739 aa24.93■■□□□ 1.58
SHCBP1-205ENST00000566016 INCENPQ9NQS7 918 aa24.93■■□□□ 1.58
SHCBP1-205ENST00000566016 RANBP6O60518 1105 aaKnown RBP24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 TTLL1O95922 423 aa24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 ZYXQ15942 572 aaKnown RBP24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 FAM47AQ5JRC9 791 aa24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 VCPKMTQ9H867 229 aa24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 RLFQ13129 1914 aa24.92■■□□□ 1.58
SHCBP1-205ENST00000566016 ZNF296Q8WUU4 475 aaPredicted RBP24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 ESR2Q92731 530 aa24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 MKL1Q969V6 931 aa24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 ASCC2Q9H1I8 757 aaPredicted RBP24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 CNNM2Q9H8M5 875 aa24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 TOMM22Q9NS69 142 aa24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 NEDD4P46934 1319 aa24.91■■□□□ 1.58
SHCBP1-205ENST00000566016 CYP21A2P08686 494 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 CYP2C8P10632 490 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 OSBPP22059 807 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 NOVP48745 357 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 C17orf99Q6UX52 265 aa24.9■■□□□ 1.58
SHCBP1-205ENST00000566016 GOPCQ9HD26 462 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms