RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 AKNAD1Q5T1N1 836 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 NEDD1Q8NHV4 660 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 FEZ1Q99689 392 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 ESYT1Q9BSJ8 1104 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 NYAP2Q9P242 653 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 PNMA3Q9UL41 463 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 AGTPBP1Q9UPW5 1226 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 LAMB1P07942 1786 aa14.92□□□□□ -0.02
SHCBP1-204ENST00000565887 PDHXO00330 501 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 AKR1B1P15121 316 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 OSBPP22059 807 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 GUCY1A2P33402 732 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 EVX2Q03828 476 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 CCDC178Q5BJE1 867 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 GADL1Q6ZQY3 521 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 MAP4K1Q92918 833 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 C12orf42Q96LP6 360 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 CNNM2Q9H8M5 875 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 PRDM10Q9NQV6 1147 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 TMX2Q9Y320 296 aa14.91□□□□□ -0.02
SHCBP1-204ENST00000565887 ATAD5Q96QE3 1844 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 TSPY2A6NKD2 308 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 FOXN1O15353 648 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 HOXA7P31268 230 aaPredicted RBP14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 HMGCS2P54868 508 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 TFAP4Q01664 338 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 ICA1Q05084 483 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 CTDSPL2Q05D32 466 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 MTMR2Q13614 643 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 MOGSQ13724 837 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 ARHGEF6Q15052 776 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 TAF1CQ15572 869 aaPredicted RBP14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 FAM43AQ8N2R8 423 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 LPAR1Q92633 364 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 ESR2Q92731 530 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 MKL1Q969V6 931 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 PARK7Q99497 189 aaKnown RBP14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 KRT23Q9C075 422 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 MYH8P13535 1937 aa14.9□□□□□ -0.02
SHCBP1-204ENST00000565887 SMIM22K7EJ46 135 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 RANBP6O60518 1105 aaKnown RBP14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TLR2O60603 784 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 PRDM1O75626 825 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TTLL1O95922 423 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TRDNQ13061 729 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 GPAT2Q6NUI2 795 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TTC14Q96N46 770 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 GOPCQ9HD26 462 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TOMM22Q9NS69 142 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 TCP11L1Q9NUJ3 509 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 PHIPQ8WWQ0 1821 aa14.89□□□□□ -0.03
SHCBP1-204ENST00000565887 IGKV6D-41A0A0C4DH26 115 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 EPB41L2O43491 1005 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 REC8O95072 547 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 TBC1D8O95759 1140 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 HSPA8P11142 646 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 HAND2P61296 217 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 PTH1RQ03431 593 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 RNF20Q5VTR2 975 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 CCDC84Q86UT8 332 aaPredicted RBP14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 ANO2Q9NQ90 1003 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 EMILIN3Q9NT22 766 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
SHCBP1-204ENST00000565887 PCNTO95613 3336 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 PLIN4Q96Q06 1357 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 GPR25O00155 361 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 GCLCP48506 637 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 LBX1P52954 281 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 CRHR2Q13324 411 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 SHROOM1Q2M3G4 852 aaPredicted RBP14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 IQCA1Q86XH1 822 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 ACER1Q8TDN7 264 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 IL25Q9H293 177 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 HOXC10Q9NYD6 342 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
SHCBP1-204ENST00000565887 FKTNO75072 461 aa14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 ATP2B2Q01814 1243 aa14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 RRP12Q5JTH9 1297 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-204ENST00000565887 CEP95Q96GE4 821 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms