RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 NUP133Q8WUM0 1156 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 TEPSINQ96N21 525 aa21.91■■□□□ 1.1
COMMD4-213ENST00000565834 MYH4Q9Y623 1939 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 IGKV6D-41A0A0C4DH26 115 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 CPLX1O14810 134 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 CALM1P0DP23 149 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 CALM2P0DP24 149 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 CALM3P0DP25 149 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 GJB2P29033 226 aa21.9■■□□□ 1.1
COMMD4-213ENST00000565834 DCAF8L1A6NGE4 600 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 RTN1Q16799 776 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 ABCB5Q2M3G0 1257 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 PPP4R3BQ5MIZ7 849 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 NSUN7Q8NE18 718 aaKnown RBP21.89■■□□□ 1.1
COMMD4-213ENST00000565834 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 WDR90Q96KV7 1748 aa21.89■■□□□ 1.1
COMMD4-213ENST00000565834 IQCA1LA6NCM1 817 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 CTDNEP1O95476 244 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 EPHX2P34913 555 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 NOVP48745 357 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 CPLX2Q6PUV4 134 aaKnown RBP21.88■■□□□ 1.09
COMMD4-213ENST00000565834 USP50Q70EL3 339 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-213ENST00000565834 MIGA2Q7L4E1 593 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 FANCBQ8NB91 859 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 PNMA1Q8ND90 353 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 TMEM47Q9BQJ4 181 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 PPP2R3BQ9Y5P8 575 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 CCDC196A0A1B0GTZ2 297 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 JAK2O60674 1132 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 DTNBO60941 627 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 GDF11O95390 407 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 TOP1P11387 765 aaKnown RBP21.88■■□□□ 1.09
COMMD4-213ENST00000565834 CDC27P30260 824 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 MAP3K10Q02779 954 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 TROAPQ12815 778 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 PPP2R5BQ15173 497 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 TMEM179Q6ZVK1 233 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 SMARCC2Q8TAQ2 1214 aa21.88■■□□□ 1.09
COMMD4-213ENST00000565834 CDKL5O76039 1030 aa21.87■■□□□ 1.09
COMMD4-213ENST00000565834 TTLL1O95922 423 aa21.87■■□□□ 1.09
COMMD4-213ENST00000565834 ADD1P35611 737 aaKnown RBP21.87■■□□□ 1.09
COMMD4-213ENST00000565834 HMGN5P82970 282 aaKnown RBP21.87■■□□□ 1.09
COMMD4-213ENST00000565834 DCPSQ96C86 337 aaKnown RBP21.87■■□□□ 1.09
COMMD4-213ENST00000565834 CABP5Q9NP86 173 aa21.87■■□□□ 1.09
COMMD4-213ENST00000565834 FAM217BQ9NTX9 383 aaPredicted RBP21.87■■□□□ 1.09
COMMD4-213ENST00000565834 HOOK2Q96ED9 719 aa21.86■■□□□ 1.09
COMMD4-213ENST00000565834 ATAD5Q96QE3 1844 aa21.86■■□□□ 1.09
COMMD4-213ENST00000565834 NUCB2P80303 420 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 RRP1BQ14684 758 aaKnown RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 NBPF12Q5TAG4 269 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 CLEC10AQ8IUN9 316 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 CTCFLQ8NI51 663 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 DDX11Q96FC9 970 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 RBM28Q9NW13 759 aaKnown RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 GH2P01242 217 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 SEPT2Q15019 361 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 SHROOM1Q2M3G4 852 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 TAF1DQ9H5J8 278 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-213ENST00000565834 CLIP2Q9UDT6 1046 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 KIF3AQ9Y496 699 aa21.85■■□□□ 1.09
COMMD4-213ENST00000565834 DCAF15Q66K64 600 aa21.84■■□□□ 1.09
COMMD4-213ENST00000565834 SULF1Q8IWU6 871 aa21.84■■□□□ 1.09
COMMD4-213ENST00000565834 FAM184AQ8NB25 1140 aa21.84■■□□□ 1.09
COMMD4-213ENST00000565834 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
COMMD4-213ENST00000565834 MYH6P13533 1939 aa21.84■■□□□ 1.09
COMMD4-213ENST00000565834 PDCP20941 246 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 KIF5BP33176 963 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 GUCY1A2P33402 732 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 ATP2B2Q01814 1243 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 ICA1Q05084 483 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 RAB3GAP1Q15042 981 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 NTRK3Q16288 839 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 ZC3H15Q8WU90 426 aaKnown RBP21.83■■□□□ 1.09
COMMD4-213ENST00000565834 NYAP2Q9P242 653 aa21.83■■□□□ 1.09
COMMD4-213ENST00000565834 PPFIA3O75145 1194 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 IFNAR1P17181 557 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 CAP2P40123 477 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 JAG1P78504 1218 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 GRM4Q14833 912 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 PRAMEF18Q5VWM3 479 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 ZBTB21Q9ULJ3 1066 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 POTECB2RU33 542 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 EEF2P13639 858 aaKnown RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 SYT1P21579 422 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 PKP1Q13835 747 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 EAPPQ56P03 285 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 LARP1BQ659C4 914 aaKnown RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 PNMA8AQ86V59 439 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 ORC3Q9UBD5 711 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-213ENST00000565834 MTMR7Q9Y216 660 aa21.82■■□□□ 1.08
COMMD4-213ENST00000565834 PHF20L1A8MW92 1017 aa21.81■■□□□ 1.08
COMMD4-213ENST00000565834 SUPT20HL1Q3ZLR7 823 aa21.81■■□□□ 1.08
COMMD4-213ENST00000565834 PHKBQ93100 1093 aa21.81■■□□□ 1.08
COMMD4-213ENST00000565834 ZNF341Q9BYN7 854 aa21.81■■□□□ 1.08
COMMD4-213ENST00000565834 STX6O43752 255 aa21.8■■□□□ 1.08
COMMD4-213ENST00000565834 PDIA4P13667 645 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms