RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 ZNF710Q8N1W2 664 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 NAV1Q8NEY1 1877 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 CD99L2Q8TCZ2 262 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 ZBTB21Q9ULJ3 1066 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 AGTPBP1Q9UPW5 1226 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
CNOT1-208ENST00000565697 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 OSBPP22059 807 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 PLCD1P51178 756 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 BACE1P56817 501 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 ABCB5Q2M3G0 1257 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 OTOP1Q7RTM1 612 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 CCDC84Q86UT8 332 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 SMCR8Q8TEV9 937 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 PUS7LQ9H0K6 701 aaKnown RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-208ENST00000565697 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
CNOT1-208ENST00000565697 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 PTPRFP10586 1907 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 PRKAB2O43741 272 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 GH2P01242 217 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-208ENST00000565697 HOXD10P28358 340 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 USP14P54578 494 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 PDE1AP54750 535 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 HMGCS2P54868 508 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 LACTBP83111 547 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-208ENST00000565697 GABPAQ06546 454 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 TICAM2Q86XR7 235 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 EVI5LQ96CN4 794 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
CNOT1-208ENST00000565697 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-208ENST00000565697 CPA4Q9UI42 421 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
CNOT1-208ENST00000565697 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
CNOT1-208ENST00000565697 ADGRA2Q96PE1 1338 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 CYP2C8P10632 490 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 SHMT1P34896 483 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 PRMT2P55345 433 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 MTMR2Q13614 643 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 RAB3GAP1Q15042 981 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 C12orf60Q5U649 245 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 CHD1LQ86WJ1 897 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
CNOT1-208ENST00000565697 PATL2C9JE40 543 aaKnown RBP11.86□□□□□ -0.51
CNOT1-208ENST00000565697 USP17L12C9JPN9 530 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 USP17L21D6R901 530 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
CNOT1-208ENST00000565697 GPAA1O43292 621 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 IGHDP01880 384 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 CHGBP05060 677 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 BCRP11274 1271 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 GCLCP48506 637 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-208ENST00000565697 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
CNOT1-208ENST00000565697 NUCB1Q02818 461 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 TREML2Q5T2D2 321 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 FEZ1Q99689 392 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 NACAP1Q9BZK3 213 aa11.86□□□□□ -0.51
CNOT1-208ENST00000565697 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-208ENST00000565697 APPP05067 770 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 CYP2D6P10635 497 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-208ENST00000565697 PSMC4P43686 418 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 TDO2P48775 406 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 FCGRTP55899 365 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 JAG1P78504 1218 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 TMEM179Q6ZVK1 233 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 C16orf86Q6ZW13 317 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 GTF3C2Q8WUA4 911 aaPredicted RBP11.85□□□□□ -0.51
CNOT1-208ENST00000565697 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
CNOT1-208ENST00000565697 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
CNOT1-208ENST00000565697 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 M0R2C6 588 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 CDK8P49336 464 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 FAM110CQ1W6H9 321 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 ANKRD13CQ8N6S4 541 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 DYNLL2Q96FJ2 89 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 C12orf42Q96LP6 360 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms