RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 GOLGA8BA8MQT2 603 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TSPY3P0CV98 308 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TSPY8P0CW00 308 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZSCAN22P10073 491 aaPredicted RBP10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 CACNB3P54284 484 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 UBE2HP62256 183 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TFAP4Q01664 338 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 EVX2Q03828 476 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TCP10Q12799 353 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 SEC23AQ15436 765 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 FAM83AQ86UY5 434 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 NKX2-3Q8TAU0 364 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 FAM151AQ8WW52 585 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 SLC12A7Q9Y666 1083 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 TNKSO95271 1327 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 ATRNL1Q5VV63 1379 aa10.94□□□□□ -0.66
CNEP1R1-206ENST00000565556 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 WNT10BO00744 389 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZBTB43O43298 467 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 RASA1P20936 1047 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 TNNI2P48788 182 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 FAM47AQ5JRC9 791 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 IFIT1BQ5T764 474 aaKnown RBP10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 CRACR2BQ8N4Y2 399 aaPredicted RBP10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 ENAHQ8N8S7 591 aaPredicted RBP10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
CNEP1R1-206ENST00000565556 CLRN2A0PK11 232 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 TCP10L2B9ZVM9 353 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CALM1P0DP23 149 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CALM2P0DP24 149 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CALM3P0DP25 149 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 SCRN1Q12765 414 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 TNFAIP1Q13829 316 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZFPM1Q8IX07 1006 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 SLC44A5Q8NCS7 719 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 MYRIPQ8NFW9 859 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 ANKS1AQ92625 1134 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CCDC17Q96LX7 622 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 GDPD2Q9HCC8 539 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 GPRC5DQ9NZD1 345 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 KIF3AQ9Y496 699 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZC3H4Q9UPT8 1303 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CCDC196A0A1B0GTZ2 297 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 DDTLA6NHG4 134 aaPredicted RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 STX6O43752 255 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 PDCP20941 246 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 METAP2P50579 478 aaKnown RBP eCLIP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CCT2P78371 535 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 KIF4BQ2VIQ3 1234 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 NBPF9Q3BBW0 867 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 CATIPQ7Z7H3 387 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 METTL16Q86W50 562 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 VEZTQ9HBM0 779 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 HERC5Q9UII4 1024 aaKnown RBP10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 HPS5Q9UPZ3 1129 aa10.92□□□□□ -0.66
CNEP1R1-206ENST00000565556 NID2Q14112 1375 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 PLIN4Q96Q06 1357 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 CPLX1O14810 134 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 CDKL5O76039 1030 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 F13A1P00488 732 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 GJB2P29033 226 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 DNTTIP2Q5QJE6 756 aaKnown RBP10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 RBM26Q5T8P6 1007 aaKnown RBP10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 DPY19L2Q6NUT2 758 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 ZNF654Q8IZM8 581 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 SMARCC2Q8TAQ2 1214 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 CSRNP1Q96S65 589 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 USP25Q9UHP3 1055 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 SIPA1L1O43166 1804 aa10.91□□□□□ -0.66
CNEP1R1-206ENST00000565556 CNTNAP1P78357 1384 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 SHTN1A0MZ66 631 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 DDAH1O94760 285 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 ADCY5O95622 1261 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 TPM3P06753 285 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 LMOD1P29536 600 aaPredicted RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 SHMT1P34896 483 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 FOXD4L6Q3SYB3 417 aaPredicted RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 TBC1D10BQ4KMP7 808 aaPredicted RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 FOXD4L3Q6VB84 417 aaPredicted RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 SAMD7Q7Z3H4 446 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms