RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 CT47A1Q5JQC4 288 aaPredicted RBP21.28■■□□□ 1
CDH5-205ENST00000565334 C15orf52Q6ZUT6 534 aaKnown RBP21.28■■□□□ 1
CDH5-205ENST00000565334 PTF1AQ7RTS3 328 aa21.28■■□□□ 1
CDH5-205ENST00000565334 CERS3Q8IU89 383 aa21.28■■□□□ 1
CDH5-205ENST00000565334 FERMT2Q96AC1 680 aa21.28■■□□□ 1
CDH5-205ENST00000565334 VPS54Q9P1Q0 977 aa21.28■■□□□ 1
CDH5-205ENST00000565334 USP21Q9UK80 565 aa21.28■■□□□ 1
CDH5-205ENST00000565334 LY75O60449 1722 aa21.27■■□□□ 1
CDH5-205ENST00000565334 PLEKHA8P1O95397 391 aa21.27■■□□□ 1
CDH5-205ENST00000565334 MLKLQ8NB16 471 aa21.27■■□□□ 1
CDH5-205ENST00000565334 V9GY48 417 aaPredicted RBP21.27■■□□□ 1
CDH5-205ENST00000565334 CNTNAP5Q8WYK1 1306 aa21.27■■□□□ 1
CDH5-205ENST00000565334 SMIM22K7EJ46 135 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 KIF2AO00139 706 aaPredicted RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 NPHP1O15259 732 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 KIF5BP33176 963 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 RFC4P35249 363 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 SARSP49591 514 aaKnown RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 TRAPPC3LQ5T215 181 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 TMC6Q7Z403 805 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 C16orf45Q96MC5 204 aaPredicted RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 RIOK3O14730 519 aaKnown RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 ADRA2BP18089 450 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 SMARCE1Q969G3 411 aa21.26■□□□□ 0.99
CDH5-205ENST00000565334 ZHX1Q9UKY1 873 aaPredicted RBP21.26■□□□□ 0.99
CDH5-205ENST00000565334 XDHP47989 1333 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 POLR2DO15514 142 aaKnown RBP21.25■□□□□ 0.99
CDH5-205ENST00000565334 SFPQP23246 707 aaKnown RBP eCLIP21.25■□□□□ 0.99
CDH5-205ENST00000565334 LMOD1P29536 600 aaPredicted RBP21.25■□□□□ 0.99
CDH5-205ENST00000565334 TRAPPC10P48553 1259 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 ARID5BQ14865 1188 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 SMIM5Q71RC9 77 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 HSD3B7Q9H2F3 369 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 SERTAD1Q9UHV2 236 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 ROBO3Q96MS0 1386 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 TSPY2A6NKD2 308 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 LDHBP07195 334 aaKnown RBP21.25■□□□□ 0.99
CDH5-205ENST00000565334 ISM2Q6H9L7 571 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 DGKHQ86XP1 1220 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 AMOTL1Q8IY63 956 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 TNFRSF25Q93038 417 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 SHISA4Q96DD7 197 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 CSRNP2Q9H175 543 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 MAN1B1Q9UKM7 699 aa21.25■□□□□ 0.99
CDH5-205ENST00000565334 CCDC88AQ3V6T2 1871 aa21.24■□□□□ 0.99
CDH5-205ENST00000565334 CTIFO43310 598 aaKnown RBP21.24■□□□□ 0.99
CDH5-205ENST00000565334 ACTN4O43707 911 aaKnown RBP21.24■□□□□ 0.99
CDH5-205ENST00000565334 LDHCP07864 332 aa21.24■□□□□ 0.99
CDH5-205ENST00000565334 SYCP1Q15431 976 aa21.24■□□□□ 0.99
CDH5-205ENST00000565334 ZNF804AQ7Z570 1209 aa21.24■□□□□ 0.99
CDH5-205ENST00000565334 ANKS1AQ92625 1134 aa21.24■□□□□ 0.99
CDH5-205ENST00000565334 PYM1Q9BRP8 204 aaKnown RBP21.24■□□□□ 0.99
CDH5-205ENST00000565334 TNRC6CQ9HCJ0 1690 aaKnown RBP21.24■□□□□ 0.99
CDH5-205ENST00000565334 BAG3O95817 575 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 SERPINC1P01008 464 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 TUBB4AP04350 444 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 UBASH3AP57075 661 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 GRIN1Q05586 938 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 MORC3Q14149 939 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 NYAP1Q6ZVC0 841 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 SPATA20Q8TB22 786 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 BAZ2AQ9UIF9 1905 aaKnown RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 TAF1LQ8IZX4 1826 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 SCG2P13521 617 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 PPP4CP60510 307 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 PTPN14Q15678 1187 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 SPECC1Q5M775 1068 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 C12orf60Q5U649 245 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 CEP135Q66GS9 1140 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 CCAR2Q8N163 923 aaKnown RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 SRBD1Q8N5C6 995 aaKnown RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 CNBD1Q8NA66 436 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 CCDC112Q8NEF3 446 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 ENOX1Q8TC92 643 aaKnown RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 BCL11BQ9C0K0 894 aaPredicted RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 MCM9Q9NXL9 1143 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
CDH5-205ENST00000565334 MKRN1Q9UHC7 482 aaKnown RBP21.23■□□□□ 0.99
CDH5-205ENST00000565334 PSDA5PKW4 1024 aaPredicted RBP21.22■□□□□ 0.99
CDH5-205ENST00000565334 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 PFKFB3Q16875 520 aaPredicted RBP21.22■□□□□ 0.99
CDH5-205ENST00000565334 TXNRD3Q86VQ6 643 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 SH3GLB2Q9NR46 395 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 CCP110O43303 1012 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 CALML3P27482 149 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 GNAQP50148 359 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 PPP4R3BQ5MIZ7 849 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 FAM177A1Q8N128 213 aaPredicted RBP21.22■□□□□ 0.99
CDH5-205ENST00000565334 KAT14Q9H8E8 782 aa21.22■□□□□ 0.99
CDH5-205ENST00000565334 ATP2B1P20020 1258 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 ERCC5P28715 1186 aaPredicted RBP21.21■□□□□ 0.99
CDH5-205ENST00000565334 USP5P45974 858 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 NFIXQ14938 502 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 NPY5RQ15761 445 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 FAM47AQ5JRC9 791 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 TTC38Q5R3I4 469 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 ARMCX5Q6P1M9 558 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 TCP11L1Q9NUJ3 509 aa21.21■□□□□ 0.99
CDH5-205ENST00000565334 MYH6P13533 1939 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms