RNA–Protein interactions for RNA: ENST00000565034.1

NIP7-206, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-206ENST00000565034 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
NIP7-206ENST00000565034 NFIAQ12857 509 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 TNIP1Q15025 636 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 CIAPIN1Q6FI81 312 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 TMTC3Q6ZXV5 915 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 MTMR14Q8NCE2 650 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
NIP7-206ENST00000565034 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
NIP7-206ENST00000565034 PRPF3O43395 683 aaKnown RBP17.02■□□□□ 0.32
NIP7-206ENST00000565034 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 GRM4Q14833 912 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 DLGAP5Q15398 846 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 PI4KBQ9UBF8 816 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
NIP7-206ENST00000565034 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
NIP7-206ENST00000565034 XBP1P17861 261 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
NIP7-206ENST00000565034 CXCL9Q07325 125 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 FUT2Q10981 343 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 KRT40Q6A162 431 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 FOXP4Q8IVH2 680 aaPredicted RBP17.01■□□□□ 0.31
NIP7-206ENST00000565034 GPT2Q8TD30 523 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
NIP7-206ENST00000565034 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 LZTS2Q9BRK4 669 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 TDRD3Q9H7E2 651 aaKnown RBP17.01■□□□□ 0.31
NIP7-206ENST00000565034 GDPD2Q9HCC8 539 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
NIP7-206ENST00000565034 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
NIP7-206ENST00000565034 SHMT1P34896 483 aa17■□□□□ 0.31
NIP7-206ENST00000565034 KIF23Q02241 960 aaPredicted RBP17■□□□□ 0.31
NIP7-206ENST00000565034 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
NIP7-206ENST00000565034 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
NIP7-206ENST00000565034 PRMT6Q96LA8 375 aaPredicted RBP17■□□□□ 0.31
NIP7-206ENST00000565034 SPATA32Q96LK8 384 aa17■□□□□ 0.31
NIP7-206ENST00000565034 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
NIP7-206ENST00000565034 STX8Q9UNK0 236 aa17■□□□□ 0.31
NIP7-206ENST00000565034 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
NIP7-206ENST00000565034 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
NIP7-206ENST00000565034 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
NIP7-206ENST00000565034 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
NIP7-206ENST00000565034 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
NIP7-206ENST00000565034 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
NIP7-206ENST00000565034 CEP95Q96GE4 821 aa16.99■□□□□ 0.31
NIP7-206ENST00000565034 GADD45BO75293 160 aaPredicted RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 AKR1B1P15121 316 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 CACNB3P54284 484 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 TCP10Q12799 353 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 ZFPM1Q8IX07 1006 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 AIFM3Q96NN9 605 aa16.98■□□□□ 0.31
NIP7-206ENST00000565034 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.98■□□□□ 0.31
NIP7-206ENST00000565034 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
NIP7-206ENST00000565034 DDTLA6NHG4 134 aaPredicted RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 MYO1BO43795 1136 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 MMP1P03956 469 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 U2AF2P26368 475 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■■ 27.3
NIP7-206ENST00000565034 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 EIF6P56537 245 aaKnown RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 MYSM1Q5VVJ2 828 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 CAVIN1Q6NZI2 390 aaKnown RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 SH3BP5LQ7L8J4 393 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 SRBD1Q8N5C6 995 aaKnown RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 MTMR4Q9NYA4 1195 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
NIP7-206ENST00000565034 RCOR1Q9UKL0 485 aa16.97■□□□□ 0.31
NIP7-206ENST00000565034 MYH4Q9Y623 1939 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 PALM3A6NDB9 673 aaPredicted RBP16.96■□□□□ 0.31
NIP7-206ENST00000565034 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 PKN1Q16512 942 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 TATDN1Q6P1N9 297 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
NIP7-206ENST00000565034 CCDC82Q8N4S0 544 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.31
NIP7-206ENST00000565034 GJB4Q9NTQ9 266 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 RTEL1Q9NZ71 1219 aa16.96■□□□□ 0.31
NIP7-206ENST00000565034 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
NIP7-206ENST00000565034 V9GY48 417 aaPredicted RBP16.96■□□□□ 0.31
NIP7-206ENST00000565034 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
NIP7-206ENST00000565034 KIF28PB7ZC32 967 aa16.95■□□□□ 0.3
NIP7-206ENST00000565034 FZD9O00144 591 aa16.95■□□□□ 0.3
NIP7-206ENST00000565034 YEATS4O95619 227 aa16.95■□□□□ 0.3
NIP7-206ENST00000565034 TTLL1O95922 423 aa16.95■□□□□ 0.3
NIP7-206ENST00000565034 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms