RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 INHAP05111 366 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 GJB1P08034 283 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 VCAM1P19320 739 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 UBXN2AP68543 259 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 RNF208Q9H0X6 261 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 RBPJLQ9UBG7 517 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
CMTM3-209ENST00000565003 PLXNB2O15031 1838 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 MPHOSPH10O00566 681 aaKnown RBP12.09□□□□□ -0.47
CMTM3-209ENST00000565003 GJA8P48165 433 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 ZSCAN25Q6NSZ9 544 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 SLC4A4Q9Y6R1 1079 aa12.09□□□□□ -0.47
CMTM3-209ENST00000565003 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L21D6R901 530 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 USP14P54578 494 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 ERVK-24P63145 666 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 Q3C1V9 767 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 C12orf60Q5U649 245 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 CATSPERGQ6ZRH7 1159 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
CMTM3-209ENST00000565003 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
CMTM3-209ENST00000565003 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
CMTM3-209ENST00000565003 CRBNQ96SW2 442 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 PORCNQ9H237 461 aa12.08□□□□□ -0.48
CMTM3-209ENST00000565003 MYH8P13535 1937 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L15C9J2P7 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L13C9JLJ4 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L11C9JVI0 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L18D6R9N7 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L22D6RA61 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L17D6RBQ6 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L19D6RCP7 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L20D6RJB6 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 CNMDO75829 334 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 AKR1B1P15121 316 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 USP17L24Q0WX57 530 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 TRIM32Q13049 653 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 CTR9Q6PD62 1173 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 TMEM179Q6ZVK1 233 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 PI4K2BQ8TCG2 481 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 GTF3C2Q8WUA4 911 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-209ENST00000565003 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
CMTM3-209ENST00000565003 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
CMTM3-209ENST00000565003 RPAP3Q9H6T3 665 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-209ENST00000565003 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
CMTM3-209ENST00000565003 SLC34A2O95436 690 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 SGPL1O95470 568 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 HMGCRP04035 888 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 MAPK4P31152 587 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 CDK8P49336 464 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 GPR142Q7Z601 462 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 SOCS4Q8WXH5 440 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 TRIB2Q92519 343 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 APPBP2Q92624 585 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 DEFB118Q96PH6 123 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
CMTM3-209ENST00000565003 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-209ENST00000565003 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 RNF113AO15541 343 aaKnown RBP12.05□□□□□ -0.48
CMTM3-209ENST00000565003 CYP2B6P20813 491 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 ICA1Q05084 483 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 LBX2Q6XYB7 198 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 USP6NLQ92738 828 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.05□□□□□ -0.486e-8■■■■■ 50.5
CMTM3-209ENST00000565003 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-209ENST00000565003 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 ARPP21Q9UBL0 812 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-209ENST00000565003 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
CMTM3-209ENST00000565003 RLFQ13129 1914 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 M0R2C6 588 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 GPAA1O43292 621 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 FARP2O94887 1054 aaPredicted RBP12.04□□□□□ -0.48
CMTM3-209ENST00000565003 ZFYP08048 801 aaPredicted RBP12.04□□□□□ -0.48
CMTM3-209ENST00000565003 MORN1Q5T089 497 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 PLEKHH3Q7Z736 793 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 TANGO6Q9C0B7 1094 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 ARHGEF10LQ9HCE6 1279 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 SALL3Q9BXA9 1300 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms