RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 STX8Q9UNK0 236 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 BCS1LQ9Y276 419 aa22.7■■□□□ 1.22
CLN6-205ENST00000564846 PRPF3O43395 683 aaKnown RBP22.69■■□□□ 1.22
CLN6-205ENST00000564846 CMTR1Q8N1G2 835 aaKnown RBP22.69■■□□□ 1.22
CLN6-205ENST00000564846 CCDC82Q8N4S0 544 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 SPATA32Q96LK8 384 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 GJB4Q9NTQ9 266 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 TFIP11Q9UBB9 837 aaKnown RBP22.69■■□□□ 1.22
CLN6-205ENST00000564846 FAM198AQ9UFP1 575 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 FER1L6Q2WGJ9 1857 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 LTBP3Q9NS15 1303 aa22.69■■□□□ 1.22
CLN6-205ENST00000564846 NFKBIEO00221 500 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 NOVP48745 357 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 KIF23Q02241 960 aaPredicted RBP22.68■■□□□ 1.22
CLN6-205ENST00000564846 PRMT6Q96LA8 375 aaPredicted RBP22.68■■□□□ 1.22
CLN6-205ENST00000564846 TMEM47Q9BQJ4 181 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 ENTPD3O75355 529 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 CACNB3P54284 484 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 LEO1Q8WVC0 666 aaPredicted RBP22.68■■□□□ 1.22
CLN6-205ENST00000564846 TDRD3Q9H7E2 651 aaKnown RBP22.68■■□□□ 1.22
CLN6-205ENST00000564846 PI4KBQ9UBF8 816 aa22.68■■□□□ 1.22
CLN6-205ENST00000564846 SPDYE2BA6NHP3 402 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 PLEKHA8P1O95397 391 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 SPDYE6P0CI01 402 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 GUCY1A2P33402 732 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 CXCL9Q07325 125 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 ZFPM1Q8IX07 1006 aa22.67■■□□□ 1.22
CLN6-205ENST00000564846 DEKP35659 375 aaKnown RBP22.66■■□□□ 1.22
CLN6-205ENST00000564846 GNAQP50148 359 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 TCP10Q12799 353 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 GRM4Q14833 912 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 SYAP1Q96A49 352 aaPredicted RBP22.66■■□□□ 1.22
CLN6-205ENST00000564846 CEP95Q96GE4 821 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 ZBTB12Q9Y330 459 aaPredicted RBP22.66■■□□□ 1.22
CLN6-205ENST00000564846 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
CLN6-205ENST00000564846 UBE2Q2LH0YL09 131 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 TOP1P11387 765 aaKnown RBP22.66■■□□□ 1.22
CLN6-205ENST00000564846 XBP1P17861 261 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 SHMT1P34896 483 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 DLGAP5Q15398 846 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 CCDC17Q96LX7 622 aa22.66■■□□□ 1.22
CLN6-205ENST00000564846 MMP14P50281 582 aa22.65■■□□□ 1.22
CLN6-205ENST00000564846 TNIP1Q15025 636 aa22.65■■□□□ 1.22
CLN6-205ENST00000564846 SAFBQ15424 915 aaKnown RBP eCLIP22.65■■□□□ 1.22
CLN6-205ENST00000564846 FOXP4Q8IVH2 680 aaPredicted RBP22.65■■□□□ 1.22
CLN6-205ENST00000564846 ZSCAN29Q8IWY8 852 aaPredicted RBP22.65■■□□□ 1.22
CLN6-205ENST00000564846 SRBD1Q8N5C6 995 aaKnown RBP22.65■■□□□ 1.22
CLN6-205ENST00000564846 MTMR14Q8NCE2 650 aa22.65■■□□□ 1.22
CLN6-205ENST00000564846 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.65■■□□□ 1.22
CLN6-205ENST00000564846 RBM27Q9P2N5 1060 aaKnown RBP22.65■■□□□ 1.22
CLN6-205ENST00000564846 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
CLN6-205ENST00000564846 GNL2Q13823 731 aaKnown RBP22.64■■□□□ 1.22
CLN6-205ENST00000564846 V9GY48 417 aaPredicted RBP22.64■■□□□ 1.22
CLN6-205ENST00000564846 CNTNAP5Q8WYK1 1306 aa22.64■■□□□ 1.21
CLN6-205ENST00000564846 IGKV6D-41A0A0C4DH26 115 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 DDTLA6NHG4 134 aaPredicted RBP22.63■■□□□ 1.21
CLN6-205ENST00000564846 KIF28PB7ZC32 967 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 MMP1P03956 469 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 AKR1B1P15121 316 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 U2AF2P26368 475 aaKnown RBP eCLIP22.63■■□□□ 1.21
CLN6-205ENST00000564846 PKN1Q16512 942 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 PPP4R3BQ5MIZ7 849 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 MYSM1Q5VVJ2 828 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 SH3BP5LQ7L8J4 393 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 USP28Q96RU2 1077 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 SPON1Q9HCB6 807 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 MTMR4Q9NYA4 1195 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 RCOR1Q9UKL0 485 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 ISY1Q9ULR0 285 aaKnown RBP22.63■■□□□ 1.21
CLN6-205ENST00000564846 ZSCAN23Q3MJ62 389 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 LZTS2Q9BRK4 669 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 TRIM34Q9BYJ4 488 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 TMEM63CQ9P1W3 806 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 MAD2L2Q9UI95 211 aa22.63■■□□□ 1.21
CLN6-205ENST00000564846 MYH15Q9Y2K3 1946 aa22.62■■□□□ 1.21
CLN6-205ENST00000564846 GOLGA6L4A6NEF3 574 aa22.62■■□□□ 1.21
CLN6-205ENST00000564846 METTL16Q86W50 562 aaKnown RBP22.62■■□□□ 1.21
CLN6-205ENST00000564846 RTEL1Q9NZ71 1219 aa22.62■■□□□ 1.21
CLN6-205ENST00000564846 ZNF445P59923 1031 aa22.61■■□□□ 1.21
CLN6-205ENST00000564846 NLGN2Q8NFZ4 835 aa22.61■■□□□ 1.21
CLN6-205ENST00000564846 PALM3A6NDB9 673 aaPredicted RBP22.61■■□□□ 1.21
CLN6-205ENST00000564846 RPS12P25398 132 aaKnown RBP22.61■■□□□ 1.21
CLN6-205ENST00000564846 CEBPZQ03701 1054 aaKnown RBP22.61■■□□□ 1.21
CLN6-205ENST00000564846 FKBP1CQ5VVH2 108 aa22.61■■□□□ 1.21
CLN6-205ENST00000564846 FOXP1Q9H334 677 aaPredicted RBP22.61■■□□□ 1.21
CLN6-205ENST00000564846 DNAJC18Q9H819 358 aa22.61■■□□□ 1.21
CLN6-205ENST00000564846 POLR3EQ9NVU0 708 aa22.61■■□□□ 1.21
CLN6-205ENST00000564846 ZNF70Q9UC06 446 aaPredicted RBP22.61■■□□□ 1.21
CLN6-205ENST00000564846 TTLL1O95922 423 aa22.6■■□□□ 1.21
CLN6-205ENST00000564846 SPDYE2Q495Y8 402 aa22.6■■□□□ 1.21
CLN6-205ENST00000564846 TATDN1Q6P1N9 297 aa22.6■■□□□ 1.21
CLN6-205ENST00000564846 DIS3L2Q8IYB7 885 aaKnown RBP22.6■■□□□ 1.21
CLN6-205ENST00000564846 KCNJ14Q9UNX9 436 aa22.6■■□□□ 1.21
CLN6-205ENST00000564846 FSD2A1L4K1 749 aa22.59■■□□□ 1.21
CLN6-205ENST00000564846 GOLGA6L3A6NEY3 463 aa22.59■■□□□ 1.21
CLN6-205ENST00000564846 YEATS4O95619 227 aa22.59■■□□□ 1.21
CLN6-205ENST00000564846 NOSTRINQ8IVI9 506 aa22.59■■□□□ 1.21
CLN6-205ENST00000564846 STAG2Q8N3U4 1231 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms