RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KANK3Q6NY19 840 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 DZIP1Q86YF9 867 aaKnown RBP3.83□□□□□ -1.8
CHD9-213ENST00000564845 LIMCH1Q9UPQ0 1083 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 RIPOR2Q9Y4F9 1068 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 SPEF2Q9C093 1822 aa3.83□□□□□ -1.8
CHD9-213ENST00000564845 RANBP1P43487 201 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 RIPPLY1Q0D2K3 151 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 IFI16Q16666 785 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 CCDC14Q49A88 953 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 ILDR1Q86SU0 546 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 CCAR1Q8IX12 1150 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 LRRC47Q8N1G4 583 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 CCDC191Q8NCU4 936 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 BANK1Q8NDB2 785 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 STMN4Q9H169 189 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 MAP3K15Q6ZN16 1313 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 POTEB2H3BUK9 544 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 MCM5P33992 734 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 MAP4K1Q92918 833 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 OPTNQ96CV9 577 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 PLCB1Q9NQ66 1216 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 NDUFA8P51970 172 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 GTF2IP78347 998 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 SYCP1Q15431 976 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 AFDNP55196 1824 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 ROBO1Q9Y6N7 1651 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 ADCY5O95622 1261 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 PDIA3P30101 505 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 SETDB2Q96T68 719 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 CTDP1Q9Y5B0 961 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 C21orf2O43822 256 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 MKRN3Q13064 507 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 IKZF4Q9H2S9 585 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 CABP5Q9NP86 173 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 LAMA5O15230 3695 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 EIF3JO75822 258 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 MRPS25P82663 173 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 MECOMQ03112 1051 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 CETN1Q12798 172 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 TNIP1Q15025 636 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 RUFY1Q96T51 708 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 RNF41Q9H4P4 317 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 CTNNA3Q9UI47 895 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 CIZ1Q9ULV3 898 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 MINPP1Q9UNW1 487 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 IFIT3O14879 490 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 CAMTA2O94983 1202 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 SCP2P22307 547 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 CCDC150Q8NCX0 1101 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 EPSTI1Q96J88 318 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 PRR29P0C7W0 189 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 FMR1Q06787 632 aaKnown RBP eCLIP3.82□□□□□ -1.8
CHD9-213ENST00000564845 USP17L2Q6R6M4 530 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 TMCO3Q6UWJ1 677 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 KCTD1Q719H9 257 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 EXOC8Q8IYI6 725 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 KBTBD3Q8NAB2 608 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 SH3RF3Q8TEJ3 882 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 PURBQ96QR8 312 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 MTMR6Q9Y217 621 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 MCM7P33993 719 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 SF3B2Q13435 895 aaKnown RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 ZNF174Q15697 407 aa3.82□□□□□ -1.8
CHD9-213ENST00000564845 ZSCAN29Q8IWY8 852 aaPredicted RBP3.82□□□□□ -1.8
CHD9-213ENST00000564845 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.81e-6■■□□□ 13.9
CHD9-213ENST00000564845 PPP4R3AQ6IN85 833 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 NAP1L4Q99733 375 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 HAUS7Q99871 368 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 BIN2Q9UBW5 565 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 PYCARDQ9ULZ3 195 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 BAZ2BQ9UIF8 2168 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 TCHHQ07283 1943 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 PDE8BO95263 885 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 KIAA1524Q8TCG1 905 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 UTP14AQ9BVJ6 771 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 AGXT2Q9BYV1 514 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 RNF113AO15541 343 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 CBFA2T2O43439 604 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 TMEM67Q5HYA8 995 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 NAPBQ9H115 298 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 MCM9Q9NXL9 1143 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 STAMBPO95630 424 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 MKRN4PQ13434 485 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 ENOX2Q16206 610 aaKnown RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 SOGA3Q5TF21 947 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 TMC4Q7Z404 712 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 C16orf45Q96MC5 204 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 SH2D4AQ9H788 454 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 RABGAP1Q9Y3P9 1069 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 ASTN2O75129 1339 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 PDE6AP16499 860 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 TERF1P54274 439 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 RABL6Q3YEC7 729 aaPredicted RBP3.81□□□□□ -1.8
CHD9-213ENST00000564845 ZSWIM6Q9HCJ5 1215 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 CPLX1O14810 134 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 FANCGO15287 622 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 RAD17O75943 681 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 EGFRP00533 1210 aa3.81□□□□□ -1.8
CHD9-213ENST00000564845 ATP1A3P13637 1013 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms