RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 HOXA5P20719 270 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 GDNFP39905 211 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 CTSWP56202 376 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 RPS26P62854 115 aaKnown RBP5.52□□□□□ -1.53
CHD9-211ENST00000564600 SLBPQ14493 270 aaKnown RBP eCLIP5.52□□□□□ -1.53
CHD9-211ENST00000564600 SCARA3Q6AZY7 606 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 CDC37L1Q7L3B6 337 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 TTC6Q86TZ1 520 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 PHC3Q8NDX5 983 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 UBE2FQ969M7 185 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 IRF2BPLQ9H1B7 796 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 EPB41L4BQ9H329 900 aa5.52□□□□□ -1.53
CHD9-211ENST00000564600 SMG5Q9UPR3 1016 aaKnown RBP5.52□□□□□ -1.53
CHD9-211ENST00000564600 NUAK1O60285 661 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 SORBS3O60504 671 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 ST13P50502 369 aaKnown RBP5.51□□□□□ -1.53
CHD9-211ENST00000564600 MFSD4AQ8N468 514 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 ABHD4Q8TB40 342 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 CRELD1Q96HD1 420 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 WNT10AQ9GZT5 417 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 ST14Q9Y5Y6 855 aa5.51□□□□□ -1.53
CHD9-211ENST00000564600 TCAF2A6NFQ2 919 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 GRK4P32298 578 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 HNRNPUQ00839 825 aaKnown RBP eCLIP5.5□□□□□ -1.53
CHD9-211ENST00000564600 SFRP5Q5T4F7 317 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 CIAPIN1Q6FI81 312 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 BNC2Q6ZN30 1099 aaPredicted RBP5.5□□□□□ -1.53
CHD9-211ENST00000564600 HDXQ7Z353 690 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 GIPC2Q8TF65 315 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 JARID2Q92833 1246 aaPredicted RBP5.5□□□□□ -1.53
CHD9-211ENST00000564600 ALPK1Q96QP1 1244 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 NOC4LQ9BVI4 516 aaKnown RBP5.5□□□□□ -1.53
CHD9-211ENST00000564600 BCL2L13Q9BXK5 485 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 C19orf44Q9H6X5 657 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 VTI1BQ9UEU0 232 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 CAPN6Q9Y6Q1 641 aa5.5□□□□□ -1.53
CHD9-211ENST00000564600 LINC00310P59036 64 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 ZNF507Q8TCN5 953 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 KCNN1Q92952 543 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 DPH2Q9BQC3 489 aaPredicted RBP5.49□□□□□ -1.53
CHD9-211ENST00000564600 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 COPRSQ9NQ92 184 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 CORINQ9Y5Q5 1042 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 SNCAIPQ9Y6H5 919 aa5.49□□□□□ -1.53
CHD9-211ENST00000564600 FAM221AA4D161 298 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 LRIG2O94898 1065 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 PF4P02776 101 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 ERCC3P19447 782 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 GALK1P51570 392 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 ETF1P62495 437 aaKnown RBP5.48□□□□□ -1.53
CHD9-211ENST00000564600 LDLRAD1Q5T700 205 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 RHOVQ96L33 236 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 RNF32Q9H0A6 362 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 ADAMTS10Q9H324 1103 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 TJP2Q9UDY2 1190 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 JAG2Q9Y219 1238 aa5.48□□□□□ -1.53
CHD9-211ENST00000564600 F13A1P00488 732 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 BMP7P18075 431 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 FAM160A1Q05DH4 1040 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 TNK2Q07912 1038 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 CAMK2GQ13555 558 aaPredicted RBP5.47□□□□□ -1.53
CHD9-211ENST00000564600 MRPL58Q14197 206 aaKnown RBP5.47□□□□□ -1.53
CHD9-211ENST00000564600 PRAMEF13Q5VWM6 474 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 CDH24Q86UP0 819 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 AMIGO3Q86WK7 504 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 MRS2Q9HD23 443 aa5.47□□□□□ -1.53
CHD9-211ENST00000564600 A0A0G2JLL6 359 aaPredicted RBP5.46□□□□□ -1.54
CHD9-211ENST00000564600 MINDY4BA8MYZ0 360 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 ESR1P03372 595 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 LMNB1P20700 586 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 GARTP22102 1010 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 RPL6Q02878 288 aaKnown RBP5.46□□□□□ -1.54
CHD9-211ENST00000564600 TSNAXIP1Q2TAA8 658 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 TIGD5Q53EQ6 642 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 LETMD1Q6P1Q0 360 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 HID1Q8IV36 788 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 FBXO27Q8NI29 283 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 MYLIPQ8WY64 445 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 ACSF2Q96CM8 615 aaPredicted RBP5.46□□□□□ -1.54
CHD9-211ENST00000564600 TMEM74Q96NL1 305 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
CHD9-211ENST00000564600 UPK3BL1B0FP48 263 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 UPK3BL2E5RIL1 263 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 CILPO75339 1184 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 PGRP06401 933 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 MED14OSP0DP75 135 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 ZNF16P17020 682 aaPredicted RBP5.45□□□□□ -1.54
CHD9-211ENST00000564600 GBP2P32456 591 aaPredicted RBP5.45□□□□□ -1.54
CHD9-211ENST00000564600 CAP2P40123 477 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 LMNB2Q03252 620 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 TMCO4Q5TGY1 634 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 CREG2Q8IUH2 290 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 KCT2Q8NC54 265 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
CHD9-211ENST00000564600 POLR3KQ9Y2Y1 108 aaPredicted RBP5.45□□□□□ -1.54
CHD9-211ENST00000564600 GRIN3BO60391 1043 aa5.44□□□□□ -1.54
CHD9-211ENST00000564600 DNAJA2O60884 412 aa5.44□□□□□ -1.54
CHD9-211ENST00000564600 CST3P01034 146 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms