RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 BHMTQ93088 406 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 PSMD1Q99460 953 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 KNSTRNQ9Y448 316 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 USP16Q9Y5T5 823 aa6.93□□□□□ -1.3
TUBGCP4-209ENST00000564511 GNAT3A8MTJ3 354 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 TCERG1O14776 1098 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 KCNQ3O43525 872 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 IGFBP4P22692 258 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 SOX10P56693 466 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 HIF1AQ16665 826 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 RTN1Q16799 776 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 ZNF408Q9H9D4 720 aa6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 ADARB2Q9NS39 739 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 DMGDHQ9UI17 866 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-209ENST00000564511 SCN7AQ01118 1682 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 SPDYE3A6NKU9 549 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 BTBD11A6QL63 1104 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 NID1P14543 1247 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 DOC2BQ14184 412 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 HABP4Q5JVS0 413 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 IER5Q5VY09 327 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 HHIPL1Q96JK4 782 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 GLIS2Q9BZE0 524 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 GSX2Q9BZM3 304 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 CACNA1SQ13698 1873 aa6.91□□□□□ -1.3
TUBGCP4-209ENST00000564511 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 TGFBR3LH3BV60 316 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 U2SURPO15042 1029 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 GRNP28799 593 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 GATA4P43694 442 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 NOGQ13253 232 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 PRRT3Q5FWE3 981 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 NIM1KQ8IY84 436 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 RPGRQ92834 1020 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 GPRC5DQ9NZD1 345 aa6.9□□□□□ -1.3
TUBGCP4-209ENST00000564511 THSD7BQ9C0I4 1608 aa6.9□□□□□ -1.31
TUBGCP4-209ENST00000564511 UBR2Q8IWV8 1755 aa6.9□□□□□ -1.31
TUBGCP4-209ENST00000564511 ARFGEF2Q9Y6D5 1785 aa6.9□□□□□ -1.31
TUBGCP4-209ENST00000564511 PPIP5K2O43314 1243 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 SNRPA1P09661 255 aaKnown RBP6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 HUNKP57058 714 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 CXCL9Q07325 125 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 TBC1D8BQ0IIM8 1120 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 HLFQ16534 295 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 CRY2Q49AN0 593 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 CDC37L1Q7L3B6 337 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 UBE2OQ9C0C9 1292 aaKnown RBP6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 NYXQ9GZU5 481 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 TMX4Q9H1E5 349 aaPredicted RBP6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 KLK14Q9P0G3 267 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 PGAP2Q9UHJ9 254 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 COL4A5P29400 1685 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 LTBP1Q14766 1721 aa6.89□□□□□ -1.31
TUBGCP4-209ENST00000564511 SNED1Q8TER0 1413 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 TRPA1O75762 1119 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 HSPA5P11021 654 aaKnown RBP6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 ITGB7P26010 798 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 WEE1P30291 646 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 HOXA10P31260 410 aaPredicted RBP6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 GMPSP49915 693 aaPredicted RBP6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 CCINQ13939 588 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 AOC3Q16853 763 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 USP48Q86UV5 1035 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 SLC51AQ86UW1 340 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 RBM17Q96I25 401 aaKnown RBP6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 BCL2L13Q9BXK5 485 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 SLC6A14Q9UN76 642 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 CASP8AP2Q9UKL3 1982 aa6.88□□□□□ -1.31
TUBGCP4-209ENST00000564511 NPC1L1Q9UHC9 1359 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 LILRB5O75023 590 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 RAD17O75943 681 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 GPTP24298 496 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 INPP5BP32019 993 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 KIF23Q02241 960 aaPredicted RBP6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 CNGB1Q14028 1251 aaPredicted RBP6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 GRIK4Q16099 956 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 RGMBQ6NW40 437 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 DLK2Q6UY11 383 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 PHACTR3Q96KR7 559 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 SNX27Q96L92 541 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 DNAJB12Q9NXW2 375 aaKnown RBP6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.87□□□□□ -1.31
TUBGCP4-209ENST00000564511 CEMIPQ8WUJ3 1361 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 ABCC12Q96J65 1359 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 H7C1D1 291 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 NFKB1P19838 968 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 IDH3AP50213 366 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 ZNF157P51786 506 aaPredicted RBP6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 TNIP1Q15025 636 aa6.86□□□□□ -1.31
TUBGCP4-209ENST00000564511 CC2D1BQ5T0F9 858 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms