RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CASP8AP2Q9UKL3 1982 aa20.64■□□□□ 0.89
USB1-209ENST00000564387 FGRP09769 529 aa20.63■□□□□ 0.89
USB1-209ENST00000564387 HMGCS2P54868 508 aa20.63■□□□□ 0.89
USB1-209ENST00000564387 MTMR2Q13614 643 aa20.63■□□□□ 0.89
USB1-209ENST00000564387 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
USB1-209ENST00000564387 IL25Q9H293 177 aa20.63■□□□□ 0.89
USB1-209ENST00000564387 RAD50Q92878 1312 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 HOXA7P31268 230 aaPredicted RBP20.62■□□□□ 0.89
USB1-209ENST00000564387 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 TREML2Q5T2D2 321 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 EMILIN3Q9NT22 766 aa20.62■□□□□ 0.89
USB1-209ENST00000564387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
USB1-209ENST00000564387 A0A1W2PRG0 241 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 FKTNO75072 461 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 USP17L2Q6R6M4 530 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 C17orf99Q6UX52 265 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 DSCC1Q9BVC3 393 aa20.61■□□□□ 0.89
USB1-209ENST00000564387 IGKV6D-41A0A0C4DH26 115 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 MPHOSPH10O00566 681 aaKnown RBP20.6■□□□□ 0.89
USB1-209ENST00000564387 SLC3A2P08195 630 aaKnown RBP20.6■□□□□ 0.89
USB1-209ENST00000564387 USP14P54578 494 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 PDE4BQ07343 736 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 DGKZQ13574 1117 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 PARK7Q99497 189 aaKnown RBP20.6■□□□□ 0.89
USB1-209ENST00000564387 KANSL2Q9H9L4 492 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 MKNK2Q9HBH9 465 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 TACC3Q9Y6A5 838 aa20.6■□□□□ 0.89
USB1-209ENST00000564387 PLIN4Q96Q06 1357 aa20.59■□□□□ 0.89
USB1-209ENST00000564387 RUFY2Q8WXA3 655 aa20.59■□□□□ 0.89
USB1-209ENST00000564387 TMOD4Q9NZQ9 345 aa20.59■□□□□ 0.89
USB1-209ENST00000564387 TMX2Q9Y320 296 aa20.59■□□□□ 0.89
USB1-209ENST00000564387 CYP2C8P10632 490 aa20.58■□□□□ 0.89
USB1-209ENST00000564387 BCRP11274 1271 aa20.58■□□□□ 0.89
USB1-209ENST00000564387 SP3Q02447 781 aa20.58■□□□□ 0.89
USB1-209ENST00000564387 PABPC4Q13310 644 aaKnown RBP eCLIP20.58■□□□□ 0.89
USB1-209ENST00000564387 ZNF444Q8N0Y2 327 aaPredicted RBP20.58■□□□□ 0.89
USB1-209ENST00000564387 SGSM2O43147 1006 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 ORC4O43929 436 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 ICA1Q05084 483 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 CTDSPL2Q05D32 466 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 NEDD1Q8NHV4 660 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 NBPF3Q9H094 633 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 ASCC2Q9H1I8 757 aaPredicted RBP20.57■□□□□ 0.88
USB1-209ENST00000564387 NYAP2Q9P242 653 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 PNMA3Q9UL41 463 aa20.57■□□□□ 0.88
USB1-209ENST00000564387 PRDM1O75626 825 aa20.56■□□□□ 0.88
USB1-209ENST00000564387 PCP11498 1178 aaKnown RBP20.56■□□□□ 0.88
USB1-209ENST00000564387 CLEC10AQ8IUN9 316 aa20.56■□□□□ 0.88
USB1-209ENST00000564387 STK11IPQ8N1F8 1099 aa20.56■□□□□ 0.88
USB1-209ENST00000564387 ARHGEF10LQ9HCE6 1279 aa20.56■□□□□ 0.88
USB1-209ENST00000564387 EEF2P13639 858 aaKnown RBP20.55■□□□□ 0.88
USB1-209ENST00000564387 VCAM1P19320 739 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 OSBPP22059 807 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 NOVP48745 357 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 CAP1Q01518 475 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 CTU1Q7Z7A3 348 aaKnown RBP20.55■□□□□ 0.88
USB1-209ENST00000564387 MKL1Q969V6 931 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 ERO1AQ96HE7 468 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 FEZ1Q99689 392 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 SYNPO2Q9UMS6 1093 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 LAMA4Q16363 1823 aa20.55■□□□□ 0.88
USB1-209ENST00000564387 KIAA1755Q5JYT7 1200 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 STAG1Q8WVM7 1258 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 LPAR1Q92633 364 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 VCPKMTQ9H867 229 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 MTMR4Q9NYA4 1195 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 CPA4Q9UI42 421 aa20.54■□□□□ 0.88
USB1-209ENST00000564387 USP17L15C9J2P7 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L13C9JLJ4 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L11C9JVI0 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L18D6R9N7 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L22D6RA61 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L17D6RBQ6 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L19D6RCP7 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L20D6RJB6 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 GCLCP48506 637 aaPredicted RBP20.53■□□□□ 0.88
USB1-209ENST00000564387 NT5C2P49902 561 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 LACTBP83111 547 aaPredicted RBP20.53■□□□□ 0.88
USB1-209ENST00000564387 TFAP4Q01664 338 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 USP17L24Q0WX57 530 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 AKNAD1Q5T1N1 836 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 CATSPERGQ6ZRH7 1159 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 CTNNA3Q9UI47 895 aa20.53■□□□□ 0.88
USB1-209ENST00000564387 ZNF213O14771 459 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
USB1-209ENST00000564387 PKN2Q16513 984 aaKnown RBP20.52■□□□□ 0.88
USB1-209ENST00000564387 POTEEQ6S8J3 1075 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 LBX2Q6XYB7 198 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 CEP95Q96GE4 821 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
USB1-209ENST00000564387 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
USB1-209ENST00000564387 TSPY3P0CV98 308 aa20.51■□□□□ 0.87
USB1-209ENST00000564387 TSPY8P0CW00 308 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms