RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 JCADQ9P266 1359 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 CALML3P27482 149 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 TTC38Q5R3I4 469 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 FKBP15Q5T1M5 1219 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CCDC181Q5TID7 509 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 DTHD1Q6ZMT9 781 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CYB5R4Q7L1T6 521 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 ADAM21Q9UKJ8 722 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CCDC175P0C221 793 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 SRLQ86TD4 932 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 GRAMD1CQ8IYS0 662 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CTAGE1Q96RT6 745 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CEP89Q96ST8 783 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CCDC151A5D8V7 595 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 GNAQP50148 359 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 TUBB4BP68371 445 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 ASIC1P78348 528 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 TFAP4Q01664 338 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 AXDND1Q5T1B0 1012 aaPredicted RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 FAM182BQ5T319 152 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
RNF40-204ENST00000563683 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 RBM28Q9NW13 759 aaKnown RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 RRP15Q9Y3B9 282 aaKnown RBP11.8□□□□□ -0.52
RNF40-204ENST00000563683 PEAK1Q9H792 1746 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 SPA17Q15506 151 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
RNF40-204ENST00000563683 PUF60Q9UHX1 559 aaKnown RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 COBLO75128 1261 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 SASH3O75995 380 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 ZNF76P36508 570 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 LRRC37A3O60309 1634 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 GTF2A1P52655 376 aaPredicted RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 UBXN1Q04323 297 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 REXO1L1PQ8IX06 675 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 CCDC148Q8NFR7 591 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 RMND1Q9NWS8 449 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 CCNL1Q9UK58 526 aaPredicted RBP11.79□□□□□ -0.52
RNF40-204ENST00000563683 CTNND2Q9UQB3 1225 aa11.79□□□□□ -0.52
RNF40-204ENST00000563683 AKR1B15C9JRZ8 316 aaPredicted RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 GSTO1P78417 241 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 LONRF3Q496Y0 759 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 MB21D2Q8IYB1 491 aaPredicted RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 EXOC1Q9NV70 894 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 PPP2R2CQ9Y2T4 447 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 PSMA7O14818 248 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 CDC27P30260 824 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 TDRD12Q587J7 1177 aaKnown RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 ZNF569Q5MCW4 686 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 MAPKAPK5Q8IW41 473 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 EEF2KMTQ96G04 330 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 UBA5Q9GZZ9 404 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNF40-204ENST00000563683 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
RNF40-204ENST00000563683 FUT8Q9BYC5 575 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
RNF40-204ENST00000563683 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 CTDNEP1O95476 244 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 AMPD3Q01432 767 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 SPAG1Q07617 926 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 MCM6Q14566 821 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 LONRF2Q1L5Z9 754 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 HDXQ7Z353 690 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 DESI2Q9BSY9 194 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 MRFAP1Q9Y605 127 aa11.77□□□□□ -0.52
RNF40-204ENST00000563683 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
RNF40-204ENST00000563683 ERCC3P19447 782 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 RSRC2Q7L4I2 434 aaKnown RBP11.77□□□□□ -0.53
RNF40-204ENST00000563683 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 UIMC1Q96RL1 719 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 GUCA1BQ9UMX6 200 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 NEDD4P46934 1319 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 VSTM4Q8IW00 320 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
RNF40-204ENST00000563683 NCAPHQ15003 741 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms