RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TRIM34Q9BYJ4 488 aa17.78■□□□□ 0.44
RPUSD1-204ENST00000563560 KIAA1683Q9H0B3 1180 aa17.78■□□□□ 0.44
RPUSD1-204ENST00000563560 ASCC2Q9H1I8 757 aaPredicted RBP17.78■□□□□ 0.44
RPUSD1-204ENST00000563560 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
RPUSD1-204ENST00000563560 MYH4Q9Y623 1939 aa17.78■□□□□ 0.44
RPUSD1-204ENST00000563560 CCDC85CA6NKD9 419 aa17.77■□□□□ 0.44
RPUSD1-204ENST00000563560 AKR1B1P15121 316 aa17.77■□□□□ 0.44
RPUSD1-204ENST00000563560 SEPT2Q15019 361 aa17.77■□□□□ 0.44
RPUSD1-204ENST00000563560 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
RPUSD1-204ENST00000563560 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
RPUSD1-204ENST00000563560 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
RPUSD1-204ENST00000563560 ARMC5Q96C12 935 aa17.76■□□□□ 0.43
RPUSD1-204ENST00000563560 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
RPUSD1-204ENST00000563560 PTCH2Q9Y6C5 1203 aa17.76■□□□□ 0.43
RPUSD1-204ENST00000563560 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 GNRH1P01148 92 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 GNAT2P19087 354 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 RASA1P20936 1047 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 RAB3GAP1Q15042 981 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 USP17L2Q6R6M4 530 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 CCDC129Q6ZRS4 1044 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 IFNL3Q8IZI9 196 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 TXNRD2Q9NNW7 524 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 TACC3Q9Y6A5 838 aa17.75■□□□□ 0.43
RPUSD1-204ENST00000563560 A0A0D9SFI3 127 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 OSBPP22059 807 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 PSMC4P43686 418 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 LRRFIP1Q32MZ4 808 aaKnown RBP17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 FAM227BQ96M60 508 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 P2RX7Q99572 595 aaKnown RBP17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 SRRDQ9UH36 339 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 PNMA3Q9UL41 463 aa17.74■□□□□ 0.43
RPUSD1-204ENST00000563560 IGKV6D-41A0A0C4DH26 115 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 PEX10O60683 326 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 VCAM1P19320 739 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 GCLCP48506 637 aaPredicted RBP17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 CABP5Q9NP86 173 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 RBPJLQ9UBG7 517 aa17.73■□□□□ 0.43
RPUSD1-204ENST00000563560 PLIN4Q96Q06 1357 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 CNMDO75829 334 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 PRMT2P55345 433 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 HERVK_113P62684 666 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 CATSPERGQ6ZRH7 1159 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 TMOD4Q9NZQ9 345 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 TMX2Q9Y320 296 aa17.72■□□□□ 0.43
RPUSD1-204ENST00000563560 USP14P54578 494 aa17.71■□□□□ 0.43
RPUSD1-204ENST00000563560 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
RPUSD1-204ENST00000563560 ZBTB47Q9UFB7 747 aaPredicted RBP17.71■□□□□ 0.43
RPUSD1-204ENST00000563560 GABRQQ9UN88 632 aa17.71■□□□□ 0.43
RPUSD1-204ENST00000563560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
RPUSD1-204ENST00000563560 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 PRKCZQ05513 592 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 KIF22Q14807 665 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 ALX1Q15699 326 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 ZYXQ15942 572 aaKnown RBP17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 Q3C1V9 767 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 ZNF236Q9UL36 1845 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 ZMYM6O95789 1325 aa17.7■□□□□ 0.42
RPUSD1-204ENST00000563560 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 FGRP09769 529 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 SDSP20132 328 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 FCGRTP55899 365 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 SOX10P56693 466 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 ICA1Q05084 483 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 ARHGEF6Q15052 776 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 MYPNQ86TC9 1320 aa17.69■□□□□ 0.42
RPUSD1-204ENST00000563560 SPDYE16A6NNV3 312 aaPredicted RBP17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 TDO2P48775 406 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 PPARAQ07869 468 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 AMOTL1Q8IY63 956 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 NBPF3Q9H094 633 aa17.68■□□□□ 0.42
RPUSD1-204ENST00000563560 IL25Q9H293 177 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms