RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 GSTM4Q03013 218 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 MEX3CQ5U5Q3 659 aaKnown RBP7.1□□□□□ -1.27
CNOT1-205ENST00000563283 CLEC10AQ8IUN9 316 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 TRIM42Q8IWZ5 723 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 EHD4Q9H223 541 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 COL18A1P39060 1754 aa7.1□□□□□ -1.27
CNOT1-205ENST00000563283 A0A1W2PP64 1363 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 GLI3P10071 1580 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 GAS2O43903 313 aaKnown RBP7.09□□□□□ -1.27
CNOT1-205ENST00000563283 TIAF1O95411 115 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 DLGAP3O95886 979 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 BMP3P12645 472 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 NFIAQ12857 509 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 RNF43Q68DV7 783 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.27
CNOT1-205ENST00000563283 CCDC74AQ96AQ1 378 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 CSRNP1Q96S65 589 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 FAM83CQ9BQN1 747 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 SLIT3O75094 1523 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.27
CNOT1-205ENST00000563283 USP54Q70EL1 1684 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 LMO7Q8WWI1 1683 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
CNOT1-205ENST00000563283 ATRNO75882 1429 aa7.09□□□□□ -1.28
CNOT1-205ENST00000563283 KTN1Q86UP2 1357 aaKnown RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 RGPD5Q99666 1765 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 NWD2Q9ULI1 1742 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 HMX2A2RU54 273 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 B3GALT4O96024 378 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 GCP02774 474 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 ZC3H6P61129 1189 aaKnown RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 PTPN12Q05209 780 aaKnown RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 EXOSC6Q5RKV6 272 aaKnown RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 BEND4Q6ZU67 534 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 NME9Q86XW9 330 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 DBNDD2Q9BQY9 259 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 DCTN4Q9UJW0 460 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 BRD4O60885 1362 aaPredicted RBP7.08□□□□□ -1.28
CNOT1-205ENST00000563283 KIAA0232Q92628 1395 aa7.08□□□□□ -1.28
CNOT1-205ENST00000563283 NFAT5O94916 1531 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 FBLN1P23142 703 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 CHRNA2Q15822 529 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-205ENST00000563283 TMC7Q7Z402 723 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 NBPF11Q86T75 865 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 UNC5CLQ8IV45 518 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 KCNF1Q9H3M0 494 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 BIN2Q9UBW5 565 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-205ENST00000563283 USP31Q70CQ4 1352 aa7.07□□□□□ -1.28
CNOT1-205ENST00000563283 CYP11A1P05108 521 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 TMF1P82094 1093 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-205ENST00000563283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.06□□□□□ -1.28
CNOT1-205ENST00000563283 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-205ENST00000563283 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
CNOT1-205ENST00000563283 BTG4Q9NY30 223 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 RGS12O14924 1447 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 CPDO75976 1380 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
CNOT1-205ENST00000563283 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 EDC4Q6P2E9 1401 aaKnown RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 TMEM238LA0A1B0GVL6 79 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 FYB1O15117 783 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 TGFB1P01137 390 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 CTSBP07858 339 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 MAOBP27338 520 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 RXRBP28702 533 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 CD97P48960 835 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 RBM6P78332 1123 aaKnown RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 POU4F3Q15319 338 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 RPS26P11Q5JNZ5 115 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 ARHGEF25Q86VW2 580 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 GLIS3Q8NEA6 775 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 DDX54Q8TDD1 881 aaKnown RBP7.05□□□□□ -1.28
CNOT1-205ENST00000563283 ZFYVE1Q9HBF4 777 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 ANKRD36BQ8N2N9 1353 aa7.05□□□□□ -1.28
CNOT1-205ENST00000563283 TTC21AQ8NDW8 1320 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 SSTR4P31391 388 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 SOX4Q06945 474 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-205ENST00000563283 GRM2Q14416 872 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 DSC3Q14574 896 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 VPS72Q15906 364 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 C2CD4AQ8NCU7 369 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-205ENST00000563283 EPS8L3Q8TE67 593 aaKnown RBP7.04□□□□□ -1.28
CNOT1-205ENST00000563283 POLR3GLQ9BT43 218 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 TERF2IPQ9NYB0 399 aa7.04□□□□□ -1.28
CNOT1-205ENST00000563283 TRPC5Q9UL62 973 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-205ENST00000563283 CDK12Q9NYV4 1490 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms