RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 SMC5Q8IY18 1101 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 PXYLP1Q8TE99 480 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 COA7Q96BR5 231 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 P2RX7Q99572 595 aaKnown RBP14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 FEZ1Q99689 392 aa14.67□□□□□ -0.06
NSMCE1-204ENST00000563273 MYH1P12882 1939 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 NAV1Q8NEY1 1877 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 ROBO3Q96MS0 1386 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 GSG1L2A8MUP6 293 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 GPAA1O43292 621 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 CAPN2P17655 700 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 CDK8P49336 464 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 EVX2Q03828 476 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 USP17L24Q0WX57 530 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 SEPT2Q15019 361 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
NSMCE1-204ENST00000563273 POTEFA5A3E0 1075 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 VCAM1P19320 739 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 FLT3LGP49771 235 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 PDE1AP54750 535 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 CATSPERGQ6ZRH7 1159 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 SLC44A5Q8NCS7 719 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 ACER1Q8TDN7 264 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 SH3TC2Q8TF17 1288 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 LPAR1Q92633 364 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 RABGAP1Q9Y3P9 1069 aa14.65□□□□□ -0.06
NSMCE1-204ENST00000563273 MPHOSPH10O00566 681 aaKnown RBP14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 MAPK4P31152 587 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 UBXN2AP68543 259 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 ZMYM1Q5SVZ6 1142 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 FSD1Q9BTV5 496 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 RBPJLQ9UBG7 517 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 TMX2Q9Y320 296 aa14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 TNRC18O15417 2968 aaPredicted RBP14.64□□□□□ -0.07
NSMCE1-204ENST00000563273 CYP2D7A0A087X1C5 515 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 PATL2C9JE40 543 aaKnown RBP14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 AKR1B1P15121 316 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 ERVK-9P63128 1117 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 ERVK-24P63145 666 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 ICA1Q05084 483 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 NKX2-3Q8TAU0 364 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 KANSL2Q9H9L4 492 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 ZNF287Q9HBT7 754 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 TXNRD2Q9NNW7 524 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
NSMCE1-204ENST00000563273 RBBP6Q7Z6E9 1792 aaKnown RBP14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 M0R2C6 588 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 ADCY3O60266 1144 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 CCNA1P78396 465 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 ZYXQ15942 572 aaKnown RBP14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 EXOC6Q8TAG9 804 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 NACAP1Q9BZK3 213 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 EPB41L4AQ9HCS5 686 aaPredicted RBP14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 ZSWIM8A7E2V4 1837 aa14.62□□□□□ -0.07
NSMCE1-204ENST00000563273 BRCA2P51587 3418 aa14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 GJB1P08034 283 aa14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 XRCC5P13010 732 aaKnown RBP14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 EN2P19622 333 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 OSBPL3Q9H4L5 887 aa14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 RPAP3Q9H6T3 665 aaPredicted RBP14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 HOXC10Q9NYD6 342 aa14.61□□□□□ -0.07
NSMCE1-204ENST00000563273 MYH7P12883 1935 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 CNMDO75829 334 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 CCL5P13501 91 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 RASA1P20936 1047 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 GJA8P48165 433 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 TDO2P48775 406 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 NUCB1Q02818 461 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 COG2Q14746 738 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 MTFR1Q15390 333 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 TRMT44Q8IYL2 757 aaKnown RBP14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 MB21D1Q8N884 522 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 NUDT12Q9BQG2 462 aa14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 BIN2Q9UBW5 565 aaPredicted RBP14.6□□□□□ -0.07
NSMCE1-204ENST00000563273 SYNPO2Q9UMS6 1093 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms