RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 TMEM47Q9BQJ4 181 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 EHD4Q9H223 541 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 RBM28Q9NW13 759 aaKnown RBP20.98■□□□□ 0.95
COMMD4-208ENST00000563220 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 FIBPO43427 364 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 GPT2Q8TD30 523 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 CEP95Q96GE4 821 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 DNAJC18Q9H819 358 aa20.98■□□□□ 0.95
COMMD4-208ENST00000563220 GADD45BO75293 160 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-208ENST00000563220 ENTPD3O75355 529 aa20.97■□□□□ 0.95
COMMD4-208ENST00000563220 NOVP48745 357 aa20.97■□□□□ 0.95
COMMD4-208ENST00000563220 KLHL40Q2TBA0 621 aa20.97■□□□□ 0.95
COMMD4-208ENST00000563220 TFIP11Q9UBB9 837 aaKnown RBP20.97■□□□□ 0.95
COMMD4-208ENST00000563220 PI4KBQ9UBF8 816 aa20.97■□□□□ 0.95
COMMD4-208ENST00000563220 ZNF70Q9UC06 446 aaPredicted RBP20.97■□□□□ 0.95
COMMD4-208ENST00000563220 ECM29Q5VYK3 1845 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 SHTN1A0MZ66 631 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 CLRN2A0PK11 232 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 TNIP1Q15025 636 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 ZSCAN29Q8IWY8 852 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-208ENST00000563220 TRIM22Q8IYM9 498 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 RGS22Q8NE09 1264 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 CTCFLQ8NI51 663 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-208ENST00000563220 FHDC1Q9C0D6 1143 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-208ENST00000563220 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-208ENST00000563220 TAOK2Q9UL54 1235 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 KRT85P78386 507 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 KRT40Q6A162 431 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 SRBD1Q8N5C6 995 aaKnown RBP20.96■□□□□ 0.95
COMMD4-208ENST00000563220 MTMR14Q8NCE2 650 aa20.96■□□□□ 0.95
COMMD4-208ENST00000563220 IGKV6D-41A0A0C4DH26 115 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 FAM196BA6NMK8 535 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 TCP10L2B9ZVM9 353 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 FZD9O00144 591 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 DEXIO95424 95 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 ZBED3Q96IU2 234 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-208ENST00000563220 MAP3K14Q99558 947 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 RNF26Q9BY78 433 aaPredicted RBP20.95■□□□□ 0.94
COMMD4-208ENST00000563220 PLIN4Q96Q06 1357 aa20.95■□□□□ 0.94
COMMD4-208ENST00000563220 SPDYE2Q495Y8 402 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 WASF1Q92558 559 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 MTMR4Q9NYA4 1195 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 TCHHQ07283 1943 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 PRPF3O43395 683 aaKnown RBP20.94■□□□□ 0.94
COMMD4-208ENST00000563220 PKN1Q16512 942 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 ILDR2Q71H61 639 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-208ENST00000563220 STAG2Q8N3U4 1231 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 TMOD2Q9NZR1 351 aa20.94■□□□□ 0.94
COMMD4-208ENST00000563220 V9GY48 417 aaPredicted RBP20.94■□□□□ 0.94
COMMD4-208ENST00000563220 ATRNL1Q5VV63 1379 aa20.93■□□□□ 0.94
COMMD4-208ENST00000563220 hCG_1642624A0A1W2PR95 340 aa20.93■□□□□ 0.94
COMMD4-208ENST00000563220 KIF23Q02241 960 aaPredicted RBP20.93■□□□□ 0.94
COMMD4-208ENST00000563220 GRM4Q14833 912 aa20.93■□□□□ 0.94
COMMD4-208ENST00000563220 METTL16Q86W50 562 aaKnown RBP20.93■□□□□ 0.94
COMMD4-208ENST00000563220 MAD2L2Q9UI95 211 aa20.93■□□□□ 0.94
COMMD4-208ENST00000563220 TOP1P11387 765 aaKnown RBP20.92■□□□□ 0.94
COMMD4-208ENST00000563220 KIF5BP33176 963 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 MYOZ2Q9NPC6 264 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 MTMR7Q9Y216 660 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 CNTNAP5Q8WYK1 1306 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 WNT10BO00744 389 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 NBPF9Q3BBW0 867 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 TATDN1Q6P1N9 297 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 CLEC10AQ8IUN9 316 aa20.92■□□□□ 0.94
COMMD4-208ENST00000563220 RPS12P25398 132 aaKnown RBP20.91■□□□□ 0.94
COMMD4-208ENST00000563220 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
COMMD4-208ENST00000563220 ZNF280AP59817 542 aaPredicted RBP20.91■□□□□ 0.94
COMMD4-208ENST00000563220 AKAP17AQ02040 695 aaKnown RBP20.91■□□□□ 0.94
COMMD4-208ENST00000563220 TRIM29Q14134 588 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 CSPP1Q1MSJ5 1256 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 ARHGAP27Q6ZUM4 889 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 RASGRP2Q7LDG7 609 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 FAM151AQ8WW52 585 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 SHISA4Q96DD7 197 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 SCAND2PQ9GZW5 306 aaPredicted RBP20.91■□□□□ 0.94
COMMD4-208ENST00000563220 VEZTQ9HBM0 779 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 CNTNAP1P78357 1384 aa20.91■□□□□ 0.94
COMMD4-208ENST00000563220 EGFRP00533 1210 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 GMPSP49915 693 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 SHROOM1Q2M3G4 852 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 CERKLQ49MI3 558 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 LEO1Q8WVC0 666 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 FTOQ9C0B1 505 aaKnown RBP eCLIP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 KCNJ14Q9UNX9 436 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 PALM3A6NDB9 673 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 MPHOSPH10O00566 681 aaKnown RBP20.9■□□□□ 0.94
COMMD4-208ENST00000563220 SLC35G1Q2M3R5 365 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 FKBP1CQ5VVH2 108 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 SPATA32Q96LK8 384 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 USP28Q96RU2 1077 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 CSRNP1Q96S65 589 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 CLIP2Q9UDT6 1046 aa20.9■□□□□ 0.94
COMMD4-208ENST00000563220 COL2A1P02458 1487 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms