RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 MVPQ14764 893 aaKnown RBP7.18□□□□□ -1.26
CDH13-206ENST00000562601 PUM3Q15397 648 aaKnown RBP7.18□□□□□ -1.26
CDH13-206ENST00000562601 STRIP1Q5VSL9 837 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 FBXO33Q7Z6M2 555 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 CERS5Q8N5B7 392 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 AGBL3Q8NEM8 1001 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 ADAMTS19Q8TE59 1207 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 INSM2Q96T92 566 aaPredicted RBP7.18□□□□□ -1.26
CDH13-206ENST00000562601 GMLQ99445 158 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 BCL11AQ9H165 835 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 COPRSQ9NQ92 184 aa7.18□□□□□ -1.26
CDH13-206ENST00000562601 TRPM7Q96QT4 1865 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 MEN1O00255 615 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 FRAT2O75474 233 aaPredicted RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 IFIT1P09914 478 aaKnown RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 SLC5A1P13866 664 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 GPC1P35052 558 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 ZNF280AP59817 542 aaPredicted RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 G3BP1Q13283 466 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH13-206ENST00000562601 MTX1Q13505 466 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 GRIK5Q16478 980 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 ATP2B3Q16720 1220 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 KIF4BQ2VIQ3 1234 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 NBPF9Q3BBW0 867 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 CAVIN4Q5BKX8 364 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 CEP85Q6P2H3 762 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 TDRD7Q8NHU6 1098 aaKnown RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 LPIN2Q92539 896 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 NEUROD6Q96NK8 337 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 GLIS2Q9BZE0 524 aaPredicted RBP7.17□□□□□ -1.26
CDH13-206ENST00000562601 MYOZ2Q9NPC6 264 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 PCDHAC2Q9Y5I4 1007 aa7.17□□□□□ -1.26
CDH13-206ENST00000562601 A0A1W2PRU2 124 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ADM5C9JUS6 153 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ATP9BO43861 1147 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 SURF6O75683 361 aaKnown RBP7.16□□□□□ -1.26
CDH13-206ENST00000562601 SASH1O94885 1247 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 CTSOP43234 321 aaPredicted RBP7.16□□□□□ -1.26
CDH13-206ENST00000562601 CLN3Q13286 438 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
CDH13-206ENST00000562601 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ANGEL2Q5VTE6 544 aaKnown RBP7.16□□□□□ -1.26
CDH13-206ENST00000562601 PLEKHM2Q8IWE5 1019 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 KDF1Q8NAX2 398 aaPredicted RBP7.16□□□□□ -1.26
CDH13-206ENST00000562601 SSH3Q8TE77 659 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ZNF408Q9H9D4 720 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 DDX19BQ9UMR2 479 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 PASKQ96RG2 1323 aa7.16□□□□□ -1.26
CDH13-206ENST00000562601 ARAP2Q8WZ64 1704 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 A0A1B0GUL7 405 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 PHKA1P46020 1223 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.26
CDH13-206ENST00000562601 RBM5P52756 815 aaKnown RBP eCLIP7.15□□□□□ -1.26
CDH13-206ENST00000562601 RRP1P56182 461 aaKnown RBP7.15□□□□□ -1.26
CDH13-206ENST00000562601 MFSD14BQ5SR56 506 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 PRAMEF18Q5VWM3 479 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 KRT26Q7Z3Y9 468 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 NPAS3Q8IXF0 933 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 SIRT2Q8IXJ6 389 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 OGFOD1Q8N543 542 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 DCPSQ96C86 337 aaKnown RBP7.15□□□□□ -1.26
CDH13-206ENST00000562601 XAGE2Q96GT9 111 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 ZBTB40Q9NUA8 1239 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 GGA3Q9NZ52 723 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 PGAP2Q9UHJ9 254 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 DNMT3LQ9UJW3 386 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 HDAC9Q9UKV0 1011 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 TTF2Q9UNY4 1162 aaKnown RBP7.15□□□□□ -1.26
CDH13-206ENST00000562601 EXOC6BQ9Y2D4 811 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 AOX1Q06278 1338 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 FAM205AQ6ZU69 1335 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 MYO3BQ8WXR4 1341 aa7.15□□□□□ -1.26
CDH13-206ENST00000562601 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 WNT10BO00744 389 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 CELF2O95319 508 aaKnown RBP7.14□□□□□ -1.27
CDH13-206ENST00000562601 COL1A1P02452 1464 aaPredicted RBP7.14□□□□□ -1.27
CDH13-206ENST00000562601 NCOA4Q13772 614 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 PDE3AQ14432 1141 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 DLGAP5Q15398 846 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 CFAP100Q494V2 611 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 GORABQ5T7V8 394 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 CST9Q5W186 159 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 CCDC102BQ68D86 513 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 DNAJC5GQ8N7S2 189 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 PRMT6Q96LA8 375 aaPredicted RBP7.14□□□□□ -1.27
CDH13-206ENST00000562601 UCN2Q96RP3 112 aa7.14□□□□□ -1.27
CDH13-206ENST00000562601 NXF1Q9UBU9 619 aaKnown RBP7.14□□□□□ -1.27
CDH13-206ENST00000562601 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
CDH13-206ENST00000562601 AKAP2Q9Y2D5 859 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms