RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 MGAMO43451 1857 aa18.39■□□□□ 0.54
CCNDBP1-203ENST00000562553 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 OTOP1Q7RTM1 612 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 ARHGAP39Q9C0H5 1083 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 TRIM17Q9Y577 477 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 HTTP42858 3142 aa18.39■□□□□ 0.53
CCNDBP1-203ENST00000562553 C19orf81C9J6K1 198 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 ECM2O94769 699 aaPredicted RBP18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 BCRP11274 1271 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 SDSP20132 328 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 TMEM179Q6ZVK1 233 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 FEZ1Q99689 392 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 TMOD4Q9NZQ9 345 aa18.38■□□□□ 0.53
CCNDBP1-203ENST00000562553 CTGFP29279 349 aa18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 LACTBP83111 547 aaPredicted RBP18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 USP17L2Q6R6M4 530 aa18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 TICAM2Q86XR7 235 aa18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 NACAP1Q9BZK3 213 aa18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 NAPBQ9H115 298 aa18.37■□□□□ 0.53
CCNDBP1-203ENST00000562553 A0A1W2PRG0 241 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 RASA1P20936 1047 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 CCDC17Q96LX7 622 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 ASCC2Q9H1I8 757 aaPredicted RBP18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 EFCC1Q9HA90 598 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 PNMA3Q9UL41 463 aa18.36■□□□□ 0.53
CCNDBP1-203ENST00000562553 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
CCNDBP1-203ENST00000562553 PPARAQ07869 468 aa18.35■□□□□ 0.53
CCNDBP1-203ENST00000562553 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
CCNDBP1-203ENST00000562553 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCNDBP1-203ENST00000562553 DOCK3Q8IZD9 2030 aa18.35■□□□□ 0.53
CCNDBP1-203ENST00000562553 MYH4Q9Y623 1939 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 PRDM1O75626 825 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 OSBPP22059 807 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 HOXA7P31268 230 aaPredicted RBP18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 ICA1Q05084 483 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 PABPC4Q13310 644 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 RBBP6Q7Z6E9 1792 aaKnown RBP18.34■□□□□ 0.53
CCNDBP1-203ENST00000562553 CENPFP49454 3210 aa18.33■□□□□ 0.53
CCNDBP1-203ENST00000562553 HSPD1P10809 573 aaKnown RBP18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 VCAM1P19320 739 aa18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP14P54578 494 aa18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 ANKRD13CQ8N6S4 541 aa18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 TACC3Q9Y6A5 838 aa18.33■□□□□ 0.52
CCNDBP1-203ENST00000562553 RLFQ13129 1914 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 PEX10O60683 326 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 PSMC4P43686 418 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 CTDSPL2Q05D32 466 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 KIF22Q14807 665 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 ALX1Q15699 326 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 TRIM47Q96LD4 638 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 IL25Q9H293 177 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 LAMA4Q16363 1823 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
CCNDBP1-203ENST00000562553 SLC34A2O95436 690 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 FGAP02671 866 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 HERVK_113P62684 666 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 ARHGEF6Q15052 776 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
CCNDBP1-203ENST00000562553 HIP1O00291 1037 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 FAM110CQ1W6H9 321 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
CCNDBP1-203ENST00000562553 ZMYM6O95789 1325 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 IGKV6D-41A0A0C4DH26 115 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
CCNDBP1-203ENST00000562553 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms