RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 CTGFP29279 349 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 SMAD3P84022 425 aaKnown RBP8.17□□□□□ -1.1
TCF4-213ENST00000562543 PRKG1Q13976 671 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 KIF22Q14807 665 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
TCF4-213ENST00000562543 AMOTQ4VCS5 1084 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 RAET1EQ8TD07 263 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
TCF4-213ENST00000562543 ANGEL1Q9UNK9 670 aaKnown RBP8.17□□□□□ -1.1
TCF4-213ENST00000562543 NSFL1CQ9UNZ2 370 aaKnown RBP8.17□□□□□ -1.1
TCF4-213ENST00000562543 NIP7Q9Y221 180 aaKnown RBP eCLIP8.17□□□□□ -1.1
TCF4-213ENST00000562543 HRH3Q9Y5N1 445 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 C2CD2LO14523 706 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 COL9A2Q14055 689 aaPredicted RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 GRIN2CQ14957 1233 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 XP32Q5T750 250 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 CLMNQ96JQ2 1002 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 ADGRA2Q96PE1 1338 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 DEFB118Q96PH6 123 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 ZSCAN10Q96SZ4 725 aaPredicted RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 TMX4Q9H1E5 349 aaPredicted RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 OTOFQ9HC10 1997 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 PAK6Q9NQU5 681 aaPredicted RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 CEP126Q9P2H0 1117 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 ZNF652Q9Y2D9 606 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 DNAH14Q0VDD8 3507 aa8.16□□□□□ -1.1
TCF4-213ENST00000562543 ANKRD11Q6UB99 2663 aaPredicted RBP8.16□□□□□ -1.1
TCF4-213ENST00000562543 MAST2Q6P0Q8 1798 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 COL8A1P27658 744 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 MCCD1P59942 119 aaPredicted RBP8.15□□□□□ -1.1
TCF4-213ENST00000562543 C4orf17Q53FE4 359 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 AKNAD1Q5T1N1 836 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 XAGE2Q96GT9 111 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 DBNDD1Q9H9R9 158 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 KCNQ5Q9NR82 932 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 BIN2Q9UBW5 565 aaPredicted RBP8.15□□□□□ -1.1
TCF4-213ENST00000562543 FZD1Q9UP38 647 aa8.15□□□□□ -1.1
TCF4-213ENST00000562543 DNAH12Q6ZR08 3092 aa8.15□□□□□ -1.11
TCF4-213ENST00000562543 MYPNQ86TC9 1320 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 PI4K2BG5E9Z4 385 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 TLR2O60603 784 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
TCF4-213ENST00000562543 MSX1P28360 303 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
TCF4-213ENST00000562543 MAP2K3P46734 347 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 TMEM214Q6NUQ4 689 aaKnown RBP8.14□□□□□ -1.11
TCF4-213ENST00000562543 PPM1EQ8WY54 764 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 MYOZ2Q9NPC6 264 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 CXXC1Q9P0U4 656 aaPredicted RBP8.14□□□□□ -1.11
TCF4-213ENST00000562543 MGAMO43451 1857 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 TPRP12270 2363 aaKnown RBP8.14□□□□□ -1.11
TCF4-213ENST00000562543 LRRC37A2A6NM11 1700 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 DMDP11532 3685 aa8.14□□□□□ -1.11
TCF4-213ENST00000562543 HEG1Q9ULI3 1381 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 ABCC4O15439 1325 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 A0A1B0GTH6 734 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 UNCXA6NJT0 531 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 A1BGP04217 495 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 CTBSQ01459 385 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 NPM2Q86SE8 214 aaKnown RBP8.13□□□□□ -1.11
TCF4-213ENST00000562543 SP8Q8IXZ3 490 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 EDARADDQ8WWZ3 215 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 BRI3BPQ8WY22 251 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 SUV39H2Q9H5I1 410 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 NDUFB9Q9Y6M9 179 aa8.13□□□□□ -1.11
TCF4-213ENST00000562543 FASNP49327 2511 aaKnown RBP8.12□□□□□ -1.11
TCF4-213ENST00000562543 IBTKQ9P2D0 1353 aaPredicted RBP8.12□□□□□ -1.11
TCF4-213ENST00000562543 PFASO15067 1338 aa8.12□□□□□ -1.11
TCF4-213ENST00000562543 ECE2O60344 883 aa8.12□□□□□ -1.11
TCF4-213ENST00000562543 HOXD10P28358 340 aa8.12□□□□□ -1.11
TCF4-213ENST00000562543 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
TCF4-213ENST00000562543 FAM43AQ8N2R8 423 aa8.12□□□□□ -1.11
TCF4-213ENST00000562543 PUS7Q96PZ0 661 aaKnown RBP8.12□□□□□ -1.11
TCF4-213ENST00000562543 C11orf49Q9H6J7 331 aa8.12□□□□□ -1.11
TCF4-213ENST00000562543 COL1A1P02452 1464 aaPredicted RBP8.12□□□□□ -1.11
TCF4-213ENST00000562543 COL4A1P02462 1669 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 CHD9Q3L8U1 2897 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 BNIP3LO60238 219 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 INHAP05111 366 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 FURINP09958 794 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
TCF4-213ENST00000562543 PSMC4P43686 418 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 PRKCZQ05513 592 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 SHHQ15465 462 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 C9orf50Q5SZB4 431 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 AGBL3Q8NEM8 1001 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
TCF4-213ENST00000562543 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 ANKRD36CQ5JPF3 1778 aa8.11□□□□□ -1.11
TCF4-213ENST00000562543 NUP98P52948 1817 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 GPR179Q6PRD1 2367 aa8.1□□□□□ -1.11
TCF4-213ENST00000562543 ZFHX2Q9C0A1 2572 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms