RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 RRP12Q5JTH9 1297 aaKnown RBP19.35■□□□□ 0.69
USB1-206ENST00000562534 CCDC84Q86UT8 332 aaPredicted RBP19.35■□□□□ 0.69
USB1-206ENST00000562534 TBC1D10CQ8IV04 446 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.35■□□□□ 0.69
USB1-206ENST00000562534 ARHGEF10LQ9HCE6 1279 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 OTOFQ9HC10 1997 aa19.35■□□□□ 0.69
USB1-206ENST00000562534 CCL15-CCL14A0A0B4J2E2 113 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 A0A0G2JLL6 359 aaPredicted RBP19.34■□□□□ 0.69
USB1-206ENST00000562534 ALDH1A1P00352 501 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 USP14P54578 494 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 CCL15Q16663 113 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 SH3D19Q5HYK7 790 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 PRRT2Q7Z6L0 340 aaPredicted RBP19.34■□□□□ 0.69
USB1-206ENST00000562534 BEGAINQ9BUH8 593 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 SH2D4AQ9H788 454 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 TCP11L1Q9NUJ3 509 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
USB1-206ENST00000562534 DOCK1Q14185 1865 aa19.33■□□□□ 0.69
USB1-206ENST00000562534 SLC27A2O14975 620 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 ICA1Q05084 483 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 CCDC178Q5BJE1 867 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 CREB3L3Q68CJ9 461 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 USP17L2Q6R6M4 530 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 IFNL1Q8IU54 200 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 SIAH1Q8IUQ4 282 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 PROCA1Q8NCQ7 364 aaPredicted RBP19.33■□□□□ 0.68
USB1-206ENST00000562534 KIAA1683Q9H0B3 1180 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 MTMR4Q9NYA4 1195 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.68
USB1-206ENST00000562534 IGKV6D-41A0A0C4DH26 115 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 E7EWF7 191 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 EEF2P13639 858 aaKnown RBP19.32■□□□□ 0.68
USB1-206ENST00000562534 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
USB1-206ENST00000562534 NCOA7Q8NI08 942 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 BRI3BPQ8WY22 251 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 MKL1Q969V6 931 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 TTC14Q96N46 770 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 FEZ1Q99689 392 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 PTPN18Q99952 460 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 ZCCHC17Q9NP64 241 aaKnown RBP19.32■□□□□ 0.68
USB1-206ENST00000562534 ZSWIM5Q9P217 1185 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 CLIP2Q9UDT6 1046 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 TMX2Q9Y320 296 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 LAMB1P07942 1786 aa19.32■□□□□ 0.68
USB1-206ENST00000562534 TTLL1O95922 423 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 HMGCS2P54868 508 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 MTMR2Q13614 643 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 TSGA10IPQ3SY00 556 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 ANKRD23Q86SG2 305 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 IQCA1Q86XH1 822 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 ACER1Q8TDN7 264 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 CEP95Q96GE4 821 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 USP26Q9BXU7 913 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 WBP1LQ9NX94 342 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 SYNPO2Q9UMS6 1093 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 PLIN4Q96Q06 1357 aa19.31■□□□□ 0.68
USB1-206ENST00000562534 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 B4E1Z4 1266 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 CA12O43570 354 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 KDM4AO75164 1064 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.68
USB1-206ENST00000562534 MOGSQ13724 837 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 GADL1Q6ZQY3 521 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 RALYLQ86SE5 291 aaKnown RBP19.3■□□□□ 0.68
USB1-206ENST00000562534 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 SLC45A1Q9Y2W3 748 aa19.3■□□□□ 0.68
USB1-206ENST00000562534 NEDD4P46934 1319 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 BTBD19C9JJ37 291 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 HSPA4P34932 840 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 KRT32Q14532 448 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 C12orf42Q96LP6 360 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 GOPCQ9HD26 462 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 ATAD5Q96QE3 1844 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 MYH8P13535 1937 aa19.29■□□□□ 0.68
USB1-206ENST00000562534 IGF2BP3O00425 579 aaKnown RBP eCLIP19.28■□□□□ 0.68
USB1-206ENST00000562534 MCCP23508 829 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 NOVP48745 357 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 GPAT2Q6NUI2 795 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 DGKHQ86XP1 1220 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 LPAR1Q92633 364 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 KCNB2Q92953 911 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 SAGE1Q9NXZ1 904 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
USB1-206ENST00000562534 PDHXO00330 501 aa19.27■□□□□ 0.68
USB1-206ENST00000562534 TRPA1O75762 1119 aa19.27■□□□□ 0.68
USB1-206ENST00000562534 HOXA7P31268 230 aaPredicted RBP19.27■□□□□ 0.68
USB1-206ENST00000562534 ZYXQ15942 572 aaKnown RBP19.27■□□□□ 0.68
USB1-206ENST00000562534 CLEC10AQ8IUN9 316 aa19.27■□□□□ 0.68
USB1-206ENST00000562534 FAM43AQ8N2R8 423 aa19.27■□□□□ 0.68
USB1-206ENST00000562534 ZSCAN10Q96SZ4 725 aaPredicted RBP19.27■□□□□ 0.68
USB1-206ENST00000562534 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
USB1-206ENST00000562534 PHIPQ8WWQ0 1821 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 F5H6K3 240 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 NMT2O60551 498 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 OSBPP22059 807 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms