RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
PKD1-226ENST00000562425 PARK7Q99497 189 aaKnown RBP19.55■□□□□ 0.72
PKD1-226ENST00000562425 AGTPBP1Q9UPW5 1226 aa19.55■□□□□ 0.72
PKD1-226ENST00000562425 BAZ2AQ9UIF9 1905 aaKnown RBP19.55■□□□□ 0.72
PKD1-226ENST00000562425 USP14P54578 494 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 HMGCS2P54868 508 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 PDE4BQ07343 736 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 PPARAQ07869 468 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 MTMR2Q13614 643 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 SHROOM1Q2M3G4 852 aaPredicted RBP19.54■□□□□ 0.72
PKD1-226ENST00000562425 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 ERO1AQ96HE7 468 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 FEZ1Q99689 392 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 CENPFP49454 3210 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 ROBO3Q96MS0 1386 aa19.54■□□□□ 0.72
PKD1-226ENST00000562425 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 RBBP6Q7Z6E9 1792 aaKnown RBP19.53■□□□□ 0.72
PKD1-226ENST00000562425 TLR2O60603 784 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 SEPT2Q15019 361 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 USP17L2Q6R6M4 530 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 OTOP1Q7RTM1 612 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 ZNF444Q8N0Y2 327 aaPredicted RBP19.53■□□□□ 0.72
PKD1-226ENST00000562425 PNMA3Q9UL41 463 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 TRIM17Q9Y577 477 aa19.53■□□□□ 0.72
PKD1-226ENST00000562425 SMIM22K7EJ46 135 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 HSPD1P10809 573 aaKnown RBP19.52■□□□□ 0.72
PKD1-226ENST00000562425 AKR1B1P15121 316 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 SP3Q02447 781 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 ARHGEF6Q15052 776 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
PKD1-226ENST00000562425 STK11IPQ8N1F8 1099 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 KIAA1683Q9H0B3 1180 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 SH2D4AQ9H788 454 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 KANSL2Q9H9L4 492 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 PPP4R2Q9NY27 417 aa19.52■□□□□ 0.72
PKD1-226ENST00000562425 PHIPQ8WWQ0 1821 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 FOXP2O15409 715 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 FGAP02671 866 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 RASA1P20936 1047 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 OSBPP22059 807 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 ARHGEF10LQ9HCE6 1279 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 ZMYM6O95789 1325 aa19.51■□□□□ 0.71
PKD1-226ENST00000562425 ICA1Q05084 483 aa19.5■□□□□ 0.71
PKD1-226ENST00000562425 TREML2Q5T2D2 321 aa19.5■□□□□ 0.71
PKD1-226ENST00000562425 SMCR8Q8TEV9 937 aaPredicted RBP19.5■□□□□ 0.71
PKD1-226ENST00000562425 ANAPC4Q9UJX5 808 aa19.5■□□□□ 0.71
PKD1-226ENST00000562425 RAD50Q92878 1312 aa19.5■□□□□ 0.71
PKD1-226ENST00000562425 CYP2C8P10632 490 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 CHMLP26374 656 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 KIF22Q14807 665 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 ACER1Q8TDN7 264 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 C12orf42Q96LP6 360 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
PKD1-226ENST00000562425 HOXA7P31268 230 aaPredicted RBP19.48■□□□□ 0.71
PKD1-226ENST00000562425 IRX3P78415 501 aaPredicted RBP19.48■□□□□ 0.71
PKD1-226ENST00000562425 ZYXQ15942 572 aaKnown RBP19.48■□□□□ 0.71
PKD1-226ENST00000562425 BMP2KLQ5H9B9 411 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 C17orf99Q6UX52 265 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 ARMC5Q96C12 935 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 DSCC1Q9BVC3 393 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 CTNNA3Q9UI47 895 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 PTPN22Q9Y2R2 807 aa19.48■□□□□ 0.71
PKD1-226ENST00000562425 PRDM1O75626 825 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 GCLCP48506 637 aaPredicted RBP19.47■□□□□ 0.71
PKD1-226ENST00000562425 ATP2B2Q01814 1243 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 CTDSPL2Q05D32 466 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 EFCC1Q9HA90 598 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 CPA4Q9UI42 421 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 TMX2Q9Y320 296 aa19.47■□□□□ 0.71
PKD1-226ENST00000562425 USP17L15C9J2P7 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L13C9JLJ4 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L11C9JVI0 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L18D6R9N7 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 PCP11498 1178 aaKnown RBP19.46■□□□□ 0.71
PKD1-226ENST00000562425 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 PPP4R3BQ5MIZ7 849 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 ASCC2Q9H1I8 757 aaPredicted RBP19.46■□□□□ 0.71
PKD1-226ENST00000562425 PTPRFP10586 1907 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 ADGRA2Q96PE1 1338 aa19.46■□□□□ 0.71
PKD1-226ENST00000562425 MYH8P13535 1937 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 A0A1W2PRG0 241 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 ZNF213O14771 459 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 EEF2P13639 858 aaKnown RBP19.45■□□□□ 0.7
PKD1-226ENST00000562425 TFAP4Q01664 338 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 SIAH1Q8IUQ4 282 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 NEDD1Q8NHV4 660 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 CD99L2Q8TCZ2 262 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 LPAR1Q92633 364 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 RNF41Q9H4P4 317 aaPredicted RBP19.45■□□□□ 0.7
PKD1-226ENST00000562425 NYAP2Q9P242 653 aa19.45■□□□□ 0.7
PKD1-226ENST00000562425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
PKD1-226ENST00000562425 ORC4O43929 436 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms