RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 ARHGAP44Q17R89 818 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 LRMPQ12912 555 aa12.47□□□□□ -0.41
RPAP1-204ENST00000562303 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.41
RPAP1-204ENST00000562303 G2E3Q7L622 706 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 RDH13Q8NBN7 331 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 SWAP70Q9UH65 585 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 ZNF131P52739 623 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 FAM47AQ5JRC9 791 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 TEKT1Q969V4 418 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 CUL7Q14999 1698 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 I3L4J1 428 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
RPAP1-204ENST00000562303 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
RPAP1-204ENST00000562303 NUF2Q9BZD4 464 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 ZNF532Q9HCE3 1301 aa12.46□□□□□ -0.41
RPAP1-204ENST00000562303 EVCP57679 992 aa12.46□□□□□ -0.42
RPAP1-204ENST00000562303 MAP7Q14244 749 aa12.46□□□□□ -0.42
RPAP1-204ENST00000562303 IFT20Q8IY31 132 aa12.46□□□□□ -0.42
RPAP1-204ENST00000562303 CCDC105Q8IYK2 499 aa12.46□□□□□ -0.42
RPAP1-204ENST00000562303 TAB2Q9NYJ8 693 aa12.46□□□□□ -0.42
RPAP1-204ENST00000562303 ATP11AP98196 1134 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 IFRD2Q12894 506 aaPredicted RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 NAA25Q14CX7 972 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 PLCB4Q15147 1175 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 ZBTB8OSQ8IWT0 167 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 PHKBQ93100 1093 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 CAPN9O14815 690 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 FLOT1O75955 427 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 ALAS1P13196 640 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 KLHL7Q8IXQ5 586 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 SYCE1Q8N0S2 351 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 NBPF3Q9H094 633 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 MAGEA1P43355 309 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.426e-8■□□□□ 9.5
RPAP1-204ENST00000562303 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 KRT81Q14533 505 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 SFMBT2Q5VUG0 894 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
RPAP1-204ENST00000562303 VCX3BQ9H321 246 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
RPAP1-204ENST00000562303 CASQ2O14958 399 aaPredicted RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ZAP70P43403 619 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 KIF11P52732 1056 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ITKQ08881 620 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 MFSD14BQ5SR56 506 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 CCDC62Q6P9F0 684 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 TRIM50Q86XT4 487 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 NELFBQ8WX92 580 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 KCNJ14Q9UNX9 436 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 HGSO14964 777 aaPredicted RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 KRT15P19012 456 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 DCAF15Q66K64 600 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 SCYL2Q6P3W7 929 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 FANCCQ00597 558 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 NCAPG2Q86XI2 1143 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 CACNA2D3Q8IZS8 1091 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 MCUR1Q96AQ8 359 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 VPS37BQ9H9H4 285 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 FAM170AA1A519 330 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 SMCO2A6NFE2 343 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 C4orf50Q6ZRC1 276 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 SESTD1Q86VW0 696 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ADPGKQ9BRR6 497 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 TBC1D8O95759 1140 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 TNNC2P02585 160 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 LIG4P49917 911 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 SARNPP82979 210 aaKnown RBP12.44□□□□□ -0.42
RPAP1-204ENST00000562303 RSPH3Q86UC2 560 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 IWS1Q96ST2 819 aa12.44□□□□□ -0.42
RPAP1-204ENST00000562303 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms