RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 SRBD1Q8N5C6 995 aaKnown RBP19.18■□□□□ 0.66
PKD1-225ENST00000562297 LINC00301Q8NCQ3 95 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 CTCFLQ8NI51 663 aaPredicted RBP19.18■□□□□ 0.66
PKD1-225ENST00000562297 MAP3K14Q99558 947 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.18■□□□□ 0.66
PKD1-225ENST00000562297 KAT14Q9H8E8 782 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 CLIC4Q9Y696 253 aa19.18■□□□□ 0.66
PKD1-225ENST00000562297 GREB1LQ9C091 1923 aaPredicted RBP19.17■□□□□ 0.66
PKD1-225ENST00000562297 GOLGA6L4A6NEF3 574 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 ZBTB7AO95365 584 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 NOVP48745 357 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 NFIAQ12857 509 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 OSBPL5Q9H0X9 879 aaPredicted RBP19.17■□□□□ 0.66
PKD1-225ENST00000562297 RBSNQ9H1K0 784 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 YEATS4O95619 227 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 SERPINA10Q9UK55 444 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 KCNJ14Q9UNX9 436 aa19.17■□□□□ 0.66
PKD1-225ENST00000562297 V9GY48 417 aaPredicted RBP19.17■□□□□ 0.66
PKD1-225ENST00000562297 FER1L6Q2WGJ9 1857 aa19.16■□□□□ 0.66
PKD1-225ENST00000562297 TMEM47Q9BQJ4 181 aa19.16■□□□□ 0.66
PKD1-225ENST00000562297 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
PKD1-225ENST00000562297 LETM1O95202 739 aaPredicted RBP19.15■□□□□ 0.66
PKD1-225ENST00000562297 DIS3L2Q8IYB7 885 aaKnown RBP19.15■□□□□ 0.66
PKD1-225ENST00000562297 KLHL34Q8N239 644 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 DACT1Q9NYF0 836 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 hCG_1642624A0A1W2PR95 340 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 BTBD18B2RXH4 712 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 NR1I2O75469 434 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 GRM4Q14833 912 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 ANO1Q5XXA6 986 aa19.15■□□□□ 0.66
PKD1-225ENST00000562297 FOXP1Q9H334 677 aaPredicted RBP19.15■□□□□ 0.66
PKD1-225ENST00000562297 KIF5BP33176 963 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 TGFB2P61812 414 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 AKAP17AQ02040 695 aaKnown RBP19.14■□□□□ 0.65
PKD1-225ENST00000562297 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 ZFPM1Q8IX07 1006 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 BICD2Q8TD16 824 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 IDI2Q9BXS1 227 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 MTFR1LQ9H019 292 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 MAD2L2Q9UI95 211 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 SERPINB13Q9UIV8 391 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 PCDHA7Q9UN72 937 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 STX8Q9UNK0 236 aa19.14■□□□□ 0.65
PKD1-225ENST00000562297 ME1P48163 572 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 STAG2Q8N3U4 1231 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 KCNG4Q8TDN1 519 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 CEP95Q96GE4 821 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 FUCA2Q9BTY2 467 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 ZNF277Q9NRM2 450 aaPredicted RBP19.13■□□□□ 0.65
PKD1-225ENST00000562297 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 ATF5Q9Y2D1 282 aaPredicted RBP19.13■□□□□ 0.65
PKD1-225ENST00000562297 MYO3BQ8WXR4 1341 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 UTRNP46939 3433 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 STK38Q15208 465 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 SAFBQ15424 915 aaKnown RBP eCLIP19.13■□□□□ 0.65
PKD1-225ENST00000562297 SLC35G1Q2M3R5 365 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 PHF20Q9BVI0 1012 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 TSPY26PQ9H489 355 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 GOLPH3LQ9H4A5 285 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 DDX19AQ9NUU7 478 aaKnown RBP19.13■□□□□ 0.65
PKD1-225ENST00000562297 FAM198AQ9UFP1 575 aa19.13■□□□□ 0.65
PKD1-225ENST00000562297 SPTLC2O15270 562 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 SHMT1P34896 483 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 CACNB3P54284 484 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 SLC39A14Q15043 492 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 PTPAQ15257 358 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 ADALQ6DHV7 355 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 OXER1Q8TDS5 423 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 EHD4Q9H223 541 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 SWAP70Q9UH65 585 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 MYH4Q9Y623 1939 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 IGKV6D-41A0A0C4DH26 115 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 PALM3A6NDB9 673 aaPredicted RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 TOB1P50616 345 aaPredicted RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 NR5A1Q13285 461 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 SNW1Q13573 536 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 SF3A1Q15459 793 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 NPY5RQ15761 445 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 RBM43Q6ZSC3 357 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 CCAR1Q8IX12 1150 aaKnown RBP19.12■□□□□ 0.65
PKD1-225ENST00000562297 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 GMLQ99445 158 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 VPS33BQ9H267 617 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 PIM2Q9P1W9 311 aa19.12■□□□□ 0.65
PKD1-225ENST00000562297 A0A1W2PQ27 194 aa19.11■□□□□ 0.65
PKD1-225ENST00000562297 A0A1W2PQ64 194 aa19.11■□□□□ 0.65
PKD1-225ENST00000562297 A0A1W2PQD8 194 aa19.11■□□□□ 0.65
PKD1-225ENST00000562297 AKR1B1P15121 316 aa19.11■□□□□ 0.65
PKD1-225ENST00000562297 VEGFAP15692 232 aaPredicted RBP19.11■□□□□ 0.65
PKD1-225ENST00000562297 RBM5P52756 815 aaKnown RBP eCLIP19.11■□□□□ 0.65
PKD1-225ENST00000562297 PFKFB3Q16875 520 aaPredicted RBP19.11■□□□□ 0.65
PKD1-225ENST00000562297 LARGE2Q8N3Y3 721 aa19.11■□□□□ 0.65
PKD1-225ENST00000562297 CLSTN2Q9H4D0 955 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms