RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MNX1P50219 401 aaPredicted RBP30.61■■■□□ 2.49
NME3-202ENST00000561637 CERS3Q8IU89 383 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 AS3MTQ9HBK9 375 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 SERPINB13Q9UIV8 391 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 CUL9Q8IWT3 2517 aa30.61■■■□□ 2.49
NME3-202ENST00000561637 BACE1P56817 501 aa30.6■■■□□ 2.49
NME3-202ENST00000561637 Q7L0L9 218 aa30.6■■■□□ 2.49
NME3-202ENST00000561637 TBC1D2Q9BYX2 928 aa30.6■■■□□ 2.49
NME3-202ENST00000561637 ASCC2Q9H1I8 757 aaPredicted RBP30.6■■■□□ 2.49
NME3-202ENST00000561637 SMIM22K7EJ46 135 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 MBD4O95243 580 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 SHMT1P34896 483 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 TATDN1Q6P1N9 297 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 TMED8Q6PL24 325 aaPredicted RBP30.59■■■□□ 2.49
NME3-202ENST00000561637 ANKLE1Q8NAG6 615 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 CRNKL1Q9BZJ0 848 aaKnown RBP30.59■■■□□ 2.49
NME3-202ENST00000561637 EHD4Q9H223 541 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 GJD2Q9UKL4 321 aa30.59■■■□□ 2.49
NME3-202ENST00000561637 SYN1P17600 705 aa30.58■■■□□ 2.49
NME3-202ENST00000561637 DEFB123Q8N688 67 aa30.58■■■□□ 2.49
NME3-202ENST00000561637 HMGCRP04035 888 aa30.57■■■□□ 2.48
NME3-202ENST00000561637 TTC6Q86TZ1 520 aa30.57■■■□□ 2.48
NME3-202ENST00000561637 DCP1AQ9NPI6 582 aaPredicted RBP30.57■■■□□ 2.48
NME3-202ENST00000561637 MCM9Q9NXL9 1143 aa30.57■■■□□ 2.48
NME3-202ENST00000561637 PNMA3Q9UL41 463 aa30.57■■■□□ 2.48
NME3-202ENST00000561637 POLR3DP05423 398 aaPredicted RBP30.56■■■□□ 2.48
NME3-202ENST00000561637 SLC44A5Q8NCS7 719 aa30.56■■■□□ 2.48
NME3-202ENST00000561637 CRBNQ96SW2 442 aa30.56■■■□□ 2.48
NME3-202ENST00000561637 RPTORQ8N122 1335 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 GABPAQ06546 454 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 ZYXQ15942 572 aaKnown RBP30.55■■■□□ 2.48
NME3-202ENST00000561637 GPR153Q6NV75 609 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 NBPF3Q9H094 633 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 HMX1Q9NP08 348 aaPredicted RBP30.55■■■□□ 2.48
NME3-202ENST00000561637 EMILIN3Q9NT22 766 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 ECHDC1Q9NTX5 307 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 UNC80Q8N2C7 3258 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 MYH7P12883 1935 aa30.55■■■□□ 2.48
NME3-202ENST00000561637 USP17L10C9JJH3 530 aa30.54■■■□□ 2.48
NME3-202ENST00000561637 GUCY1A2P33402 732 aa30.54■■■□□ 2.48
NME3-202ENST00000561637 MAGEA10P43363 369 aaPredicted RBP30.54■■■□□ 2.48
NME3-202ENST00000561637 CERKLQ49MI3 558 aaPredicted RBP30.54■■■□□ 2.48
NME3-202ENST00000561637 ACER1Q8TDN7 264 aa30.54■■■□□ 2.48
NME3-202ENST00000561637 OTUD7AQ8TE49 926 aaPredicted RBP30.54■■■□□ 2.48
NME3-202ENST00000561637 DYNLL2Q96FJ2 89 aa30.54■■■□□ 2.48
NME3-202ENST00000561637 TMOD4Q9NZQ9 345 aa30.54■■■□□ 2.48
NME3-202ENST00000561637 BAZ2AQ9UIF9 1905 aaKnown RBP30.53■■■□□ 2.48
NME3-202ENST00000561637 CYP2D7A0A087X1C5 515 aa30.53■■■□□ 2.48
NME3-202ENST00000561637 GCLCP48506 637 aaPredicted RBP30.53■■■□□ 2.48
NME3-202ENST00000561637 RAB3GAP1Q15042 981 aa30.53■■■□□ 2.48
NME3-202ENST00000561637 P2RX7Q99572 595 aaKnown RBP30.53■■■□□ 2.48
NME3-202ENST00000561637 GINM1Q9NU53 330 aa30.53■■■□□ 2.48
NME3-202ENST00000561637 ABCB5Q2M3G0 1257 aa30.52■■■□□ 2.48
NME3-202ENST00000561637 POTEEQ6S8J3 1075 aa30.52■■■□□ 2.48
NME3-202ENST00000561637 TRIB2Q92519 343 aa30.52■■■□□ 2.48
NME3-202ENST00000561637 PUS7LQ9H0K6 701 aaKnown RBP30.52■■■□□ 2.48
NME3-202ENST00000561637 PABPC4Q13310 644 aaKnown RBP eCLIP30.51■■■□□ 2.473e-7■■■■□ 23
NME3-202ENST00000561637 LRIT3Q3SXY7 679 aa30.51■■■□□ 2.47
NME3-202ENST00000561637 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.51■■■□□ 2.475e-32■■■■□ 24.1
NME3-202ENST00000561637 C11orf49Q9H6J7 331 aa30.51■■■□□ 2.47
NME3-202ENST00000561637 TXNRD2Q9NNW7 524 aa30.51■■■□□ 2.47
NME3-202ENST00000561637 IRX3P78415 501 aaPredicted RBP30.5■■■□□ 2.47
NME3-202ENST00000561637 UBE3CQ15386 1083 aa30.5■■■□□ 2.47
NME3-202ENST00000561637 TDHQ8IZJ6 230 aa30.5■■■□□ 2.47
NME3-202ENST00000561637 MTMR10Q9NXD2 777 aa30.5■■■□□ 2.47
NME3-202ENST00000561637 OGDHLQ9ULD0 1010 aa30.5■■■□□ 2.47
NME3-202ENST00000561637 C19orf81C9J6K1 198 aa30.49■■■□□ 2.47
NME3-202ENST00000561637 HOXA7P31268 230 aaPredicted RBP30.49■■■□□ 2.47
NME3-202ENST00000561637 SEPT2Q15019 361 aa30.49■■■□□ 2.47
NME3-202ENST00000561637 FEZ1Q99689 392 aa30.49■■■□□ 2.47
NME3-202ENST00000561637 STXBP5LQ9Y2K9 1186 aa30.49■■■□□ 2.47
NME3-202ENST00000561637 PFASO15067 1338 aa30.48■■■□□ 2.47
NME3-202ENST00000561637 CYP2B6P20813 491 aa30.48■■■□□ 2.47
NME3-202ENST00000561637 HERVK_113P62684 666 aa30.48■■■□□ 2.47
NME3-202ENST00000561637 USP17L2Q6R6M4 530 aa30.48■■■□□ 2.47
NME3-202ENST00000561637 CLEC10AQ8IUN9 316 aa30.48■■■□□ 2.47
NME3-202ENST00000561637 MAP3K21Q5TCX8 1036 aa30.46■■■□□ 2.47
NME3-202ENST00000561637 UBE2OQ9C0C9 1292 aaKnown RBP30.46■■■□□ 2.47
NME3-202ENST00000561637 MORF4L1Q9UBU8 362 aa30.46■■■□□ 2.47
NME3-202ENST00000561637 SLC4A4Q9Y6R1 1079 aa30.46■■■□□ 2.47
NME3-202ENST00000561637 LAMA2P24043 3122 aaKnown RBP30.45■■■□□ 2.47
NME3-202ENST00000561637 MPHOSPH10O00566 681 aaKnown RBP30.45■■■□□ 2.47
NME3-202ENST00000561637 CABP5Q9NP86 173 aa30.45■■■□□ 2.47
NME3-202ENST00000561637 RBPJLQ9UBG7 517 aa30.45■■■□□ 2.47
NME3-202ENST00000561637 DNAH12Q6ZR08 3092 aa30.45■■■□□ 2.46
NME3-202ENST00000561637 A0A1W2PRG0 241 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 USP17L12C9JPN9 530 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 USP17L21D6R901 530 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 PRKAR2AP13861 404 aaKnown RBP30.44■■■□□ 2.46
NME3-202ENST00000561637 AKR1B1P15121 316 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 KBTBD3Q8NAB2 608 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 C12orf42Q96LP6 360 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 ATP8A2Q9NTI2 1148 aa30.44■■■□□ 2.46
NME3-202ENST00000561637 Q3C1V9 767 aa30.43■■■□□ 2.46
NME3-202ENST00000561637 C12orf60Q5U649 245 aa30.43■■■□□ 2.46
NME3-202ENST00000561637 OSBP2Q969R2 916 aa30.43■■■□□ 2.46
NME3-202ENST00000561637 PAGR1Q9BTK6 254 aa30.43■■■□□ 2.46
NME3-202ENST00000561637 KIAA1683Q9H0B3 1180 aa30.43■■■□□ 2.46
NME3-202ENST00000561637 VCAM1P19320 739 aa30.42■■■□□ 2.46
NME3-202ENST00000561637 PI4K2BQ8TCG2 481 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms