RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
PKM-205ENST00000561609 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
PKM-205ENST00000561609 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
PKM-205ENST00000561609 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
PKM-205ENST00000561609 DEXIO95424 95 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 SHMT1P34896 483 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 TCP10Q12799 353 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 TNIP1Q15025 636 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
PKM-205ENST00000561609 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
PKM-205ENST00000561609 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 FIBPO43427 364 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 MBD3O95983 291 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
PKM-205ENST00000561609 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 MMP14P50281 582 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 PRELPP51888 382 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 RASSF7Q02833 373 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
PKM-205ENST00000561609 CMTR1Q8N1G2 835 aaKnown RBP13.14□□□□□ -0.31
PKM-205ENST00000561609 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 ZBED3Q96IU2 234 aaPredicted RBP13.14□□□□□ -0.31
PKM-205ENST00000561609 GJB4Q9NTQ9 266 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 PI4KBQ9UBF8 816 aa13.14□□□□□ -0.31
PKM-205ENST00000561609 ELP1O95163 1332 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 MYH6P13533 1939 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 UBE2Q2LH0YL09 131 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
PKM-205ENST00000561609 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
PKM-205ENST00000561609 AKR1B1P15121 316 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 KIF5BP33176 963 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 GSE1Q14687 1217 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 GRM4Q14833 912 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 KRT40Q6A162 431 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
PKM-205ENST00000561609 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
PKM-205ENST00000561609 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
PKM-205ENST00000561609 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 CNTNAP5Q8WYK1 1306 aa13.13□□□□□ -0.31
PKM-205ENST00000561609 FZD9O00144 591 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
PKM-205ENST00000561609 RPS12P25398 132 aaKnown RBP13.12□□□□□ -0.31
PKM-205ENST00000561609 UBE2HP62256 183 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 KIF23Q02241 960 aaPredicted RBP13.12□□□□□ -0.31
PKM-205ENST00000561609 TRIM29Q14134 588 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 BRAPQ7Z569 592 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
PKM-205ENST00000561609 CCDC17Q96LX7 622 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 MTMR4Q9NYA4 1195 aa13.12□□□□□ -0.31
PKM-205ENST00000561609 GNAQP50148 359 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 PKN1Q16512 942 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 FKBP1CQ5VVH2 108 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 LEO1Q8WVC0 666 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 MAD2L2Q9UI95 211 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 CNTNAP1P78357 1384 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 CLRN2A0PK11 232 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 MMP1P03956 469 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
PKM-205ENST00000561609 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
PKM-205ENST00000561609 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.314e-9■■■■□ 20.6
PKM-205ENST00000561609 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
PKM-205ENST00000561609 PPP4R3BQ5MIZ7 849 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 DPF2Q92785 391 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
PKM-205ENST00000561609 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
PKM-205ENST00000561609 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
PKM-205ENST00000561609 WNT10BO00744 389 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 TTLL1O95922 423 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
PKM-205ENST00000561609 MYSM1Q5VVJ2 828 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
PKM-205ENST00000561609 FAM83AQ86UY5 434 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms