RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 SLC1A4P43007 532 aa18.56■□□□□ 0.56
AP4E1-205ENST00000561393 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
AP4E1-205ENST00000561393 ZNF772Q68DY9 489 aaPredicted RBP18.56■□□□□ 0.56
AP4E1-205ENST00000561393 KIF18AQ8NI77 898 aa18.56■□□□□ 0.56
AP4E1-205ENST00000561393 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
AP4E1-205ENST00000561393 NSUN4Q96CB9 384 aaKnown RBP18.56■□□□□ 0.56
AP4E1-205ENST00000561393 RMND1Q9NWS8 449 aa18.56■□□□□ 0.56
AP4E1-205ENST00000561393 CTDNEP1O95476 244 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 TRMT44Q8IYL2 757 aaKnown RBP18.55■□□□□ 0.56
AP4E1-205ENST00000561393 BLIDQ8IZY5 108 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 PNPLA7Q6ZV29 1317 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 FGFR2P21802 821 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 GPSM2P81274 684 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 TXKP42681 527 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 PDE4CQ08493 712 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 ZYXQ15942 572 aaKnown RBP18.55■□□□□ 0.56
AP4E1-205ENST00000561393 INF2Q27J81 1249 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 PPP4R3BQ5MIZ7 849 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 CCDC150Q8NCX0 1101 aa18.55■□□□□ 0.56
AP4E1-205ENST00000561393 WTIPA6NIX2 430 aaPredicted RBP18.54■□□□□ 0.56
AP4E1-205ENST00000561393 SMCO2A6NFE2 343 aa18.54■□□□□ 0.56
AP4E1-205ENST00000561393 PTGDRQ13258 359 aa18.54■□□□□ 0.56
AP4E1-205ENST00000561393 FOXP1Q9H334 677 aaPredicted RBP18.54■□□□□ 0.56
AP4E1-205ENST00000561393 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
AP4E1-205ENST00000561393 NONOQ15233 471 aaKnown RBP eCLIP18.54■□□□□ 0.56
AP4E1-205ENST00000561393 C11orf57Q6ZUT1 292 aaPredicted RBP18.54■□□□□ 0.56
AP4E1-205ENST00000561393 CACNA1FO60840 1977 aa18.54■□□□□ 0.56
AP4E1-205ENST00000561393 NFE2L3Q9Y4A8 694 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 PCDHB6Q9Y5E3 794 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 URI1O94763 535 aaPredicted RBP18.53■□□□□ 0.56
AP4E1-205ENST00000561393 FANCCQ00597 558 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 ST3GAL1Q11201 340 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 IGDCC4Q8TDY8 1250 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 FERMT2Q96AC1 680 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 BLZF1Q9H2G9 400 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 PCDHA5Q9Y5H7 936 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 ZSCAN12O43309 604 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 MRPL12P52815 198 aaKnown RBP18.53■□□□□ 0.56
AP4E1-205ENST00000561393 BIN2Q9UBW5 565 aaPredicted RBP18.53■□□□□ 0.56
AP4E1-205ENST00000561393 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
AP4E1-205ENST00000561393 PSMA7O14818 248 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 DPCR1Q3MIW9 517 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
AP4E1-205ENST00000561393 FDPSP14324 419 aaKnown RBP18.52■□□□□ 0.56
AP4E1-205ENST00000561393 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 KRBA2Q6ZNG9 492 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 GUCY1A2P33402 732 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 SNW1Q13573 536 aaKnown RBP18.52■□□□□ 0.56
AP4E1-205ENST00000561393 REXO1Q8N1G1 1221 aaKnown RBP18.52■□□□□ 0.56
AP4E1-205ENST00000561393 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
AP4E1-205ENST00000561393 KIF28PB7ZC32 967 aa18.52■□□□□ 0.55
AP4E1-205ENST00000561393 LRMPQ12912 555 aa18.52■□□□□ 0.55
AP4E1-205ENST00000561393 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
AP4E1-205ENST00000561393 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 FKBP15Q5T1M5 1219 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 TXNRD3Q86VQ6 643 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 LZTS2Q9BRK4 669 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 GOLPH3LQ9H4A5 285 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 RGPD2P0DJD1 1756 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 NPR1P16066 1061 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 CACNB3P54284 484 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 ENOX2Q16206 610 aaKnown RBP18.51■□□□□ 0.55
AP4E1-205ENST00000561393 FBXO33Q7Z6M2 555 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 FCHSD1Q86WN1 690 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 TSG101Q99816 390 aa18.51■□□□□ 0.55
AP4E1-205ENST00000561393 XPO4Q9C0E2 1151 aaKnown RBP18.51■□□□□ 0.55
AP4E1-205ENST00000561393 PPP6R2O75170 966 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 OXER1Q8TDS5 423 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 SERPINB13Q9UIV8 391 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 CDK8P49336 464 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 KRT25Q7Z3Z0 450 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 CDC25AP30304 524 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 CCT6AP40227 531 aaKnown RBP18.5■□□□□ 0.55
AP4E1-205ENST00000561393 CEP135Q66GS9 1140 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 VGLL2Q8N8G2 317 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 MLKLQ8NB16 471 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 CAGE1Q8TC20 777 aa18.5■□□□□ 0.55
AP4E1-205ENST00000561393 ARGLU1Q9NWB6 273 aaPredicted RBP18.5■□□□□ 0.55
AP4E1-205ENST00000561393 KIF2AO00139 706 aaPredicted RBP18.49■□□□□ 0.55
AP4E1-205ENST00000561393 POLD1P28340 1107 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 BAG6P46379 1132 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 ADCY7P51828 1080 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 GRAMD1CQ8IYS0 662 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 PRPF3O43395 683 aaKnown RBP18.49■□□□□ 0.55
AP4E1-205ENST00000561393 USH1GQ495M9 461 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.49■□□□□ 0.55
AP4E1-205ENST00000561393 RBM6P78332 1123 aaKnown RBP18.49■□□□□ 0.55
AP4E1-205ENST00000561393 DLGAP5Q15398 846 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 KIAA1328Q86T90 577 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 SYMPKQ92797 1274 aaKnown RBP18.49■□□□□ 0.55
AP4E1-205ENST00000561393 COA1Q9GZY4 146 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms