RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SPINK2P20155 84 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 TARSP26639 723 aaKnown RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 GRNP28799 593 aaKnown RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 USP5P45974 858 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 NFIAQ12857 509 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 FAM50AQ14320 339 aaKnown RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 TMC7Q7Z402 723 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 ZNF438Q7Z4V0 828 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 ZDHHC13Q8IUH4 622 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 MAP4K3Q8IVH8 894 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 ZSCAN29Q8IWY8 852 aaPredicted RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 IL22RA1Q8N6P7 574 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 UTP4Q969X6 686 aaKnown RBP4.68□□□□□ -1.66
SPG11-225ENST00000561391 PLD4Q96BZ4 506 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 RBSNQ9H1K0 784 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 KCNMB2Q9Y691 235 aa4.68□□□□□ -1.66
SPG11-225ENST00000561391 NHSQ6T4R5 1651 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 LMO7Q8WWI1 1683 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 TNRC6CQ9HCJ0 1690 aaKnown RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 ANKARQ7Z5J8 1434 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 YTHDC2Q9H6S0 1430 aaKnown RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 ADAMTS4O75173 837 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 GHRHP01286 108 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 RPLP1P05386 114 aaKnown RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 KCNA3P22001 575 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 NRLP54845 237 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 TRIP4Q15650 581 aaPredicted RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 DALRD3Q5D0E6 543 aaKnown RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 Q6ZS46 218 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 AMIGO3Q86WK7 504 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 GPR101Q96P66 508 aaPredicted RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 CEP41Q9BYV8 373 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 NIF3L1Q9GZT8 377 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 PIM2Q9P1W9 311 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 N4BP2Q86UW6 1770 aaPredicted RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 CASP8AP2Q9UKL3 1982 aa4.67□□□□□ -1.66
SPG11-225ENST00000561391 VIRMAQ69YN4 1812 aaKnown RBP4.67□□□□□ -1.66
SPG11-225ENST00000561391 LOC105371045A0A1W2PR82 267 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 RASSF10A6NK89 507 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 MMP10P09238 476 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 PLCB3Q01970 1234 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 TTC39BQ5VTQ0 682 aaPredicted RBP4.66□□□□□ -1.66
SPG11-225ENST00000561391 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.66□□□□□ -1.66
SPG11-225ENST00000561391 GJD3Q8N144 294 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 FOXD4L4Q8WXT5 416 aaPredicted RBP4.66□□□□□ -1.66
SPG11-225ENST00000561391 NSUN5Q96P11 429 aaKnown RBP4.66□□□□□ -1.66
SPG11-225ENST00000561391 CITED4Q96RK1 184 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 DBNDD2Q9BQY9 259 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 RBCK1Q9BYM8 510 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 ELP3Q9H9T3 547 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 TMEM63CQ9P1W3 806 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 ABT1Q9ULW3 272 aaKnown RBP4.66□□□□□ -1.66
SPG11-225ENST00000561391 KIF1BO60333 1816 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 ACEP12821 1306 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 PASKQ96RG2 1323 aa4.66□□□□□ -1.66
SPG11-225ENST00000561391 AOC2O75106 756 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 PSAPP07602 524 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 IL2RBP14784 551 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 MAPK8P45983 427 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 EHHADHQ08426 723 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 SETDB1Q15047 1291 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 UVSSAQ2YD98 709 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 CYP4F22Q6NT55 531 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 DNAJC14Q6Y2X3 702 aaPredicted RBP4.65□□□□□ -1.67
SPG11-225ENST00000561391 ACAD11Q709F0 780 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 DTX1Q86Y01 620 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 CAPNS2Q96L46 248 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 DMRTB1Q96MA1 342 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 ASB16Q96NS5 453 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 UBL7Q96S82 380 aaPredicted RBP4.65□□□□□ -1.67
SPG11-225ENST00000561391 C7orf69Q9H7B7 122 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 NLRP2Q9NX02 1062 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 FOXD3Q9UJU5 478 aaPredicted RBP4.65□□□□□ -1.67
SPG11-225ENST00000561391 ANGEL1Q9UNK9 670 aaKnown RBP4.65□□□□□ -1.67
SPG11-225ENST00000561391 PKD1L3Q7Z443 1732 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 COL18A1P39060 1754 aa4.65□□□□□ -1.67
SPG11-225ENST00000561391 HMX2A2RU54 273 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 J3QW42 95 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 GPR182O15218 404 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 TNFRSF21O75509 655 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 LMNB1P20700 586 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 ORC1Q13415 861 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 RNF43Q68DV7 783 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 PDE12Q6L8Q7 609 aaKnown RBP4.64□□□□□ -1.67
SPG11-225ENST00000561391 OGFOD2Q6N063 350 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 TRIM42Q8IWZ5 723 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 C1orf127Q8N9H9 656 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 FAM129BQ96TA1 746 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 MUC3BQ9H195 1237 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 ABI2Q9NYB9 513 aaPredicted RBP4.64□□□□□ -1.67
SPG11-225ENST00000561391 ADGRE2Q9UHX3 823 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 TRAK1Q9UPV9 953 aa4.64□□□□□ -1.67
SPG11-225ENST00000561391 LOC102724428A0A0B4J2F2 783 aa4.63□□□□□ -1.67
SPG11-225ENST00000561391 MMP20O60882 483 aa4.63□□□□□ -1.67
SPG11-225ENST00000561391 PHACTR2O75167 634 aa4.63□□□□□ -1.67
SPG11-225ENST00000561391 DDNO94850 711 aaPredicted RBP4.63□□□□□ -1.67
SPG11-225ENST00000561391 EGFRP00533 1210 aa4.63□□□□□ -1.67
SPG11-225ENST00000561391 POLR3DP05423 398 aaPredicted RBP4.63□□□□□ -1.67
SPG11-225ENST00000561391 NEFLP07196 543 aa4.63□□□□□ -1.67
SPG11-225ENST00000561391 CHRNA5P30532 468 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms