RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 PTPN22Q9Y2R2 807 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 AFG3L2Q9Y4W6 797 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 FLT1P17948 1338 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 PARP14Q460N5 1801 aa9.06□□□□□ -0.96
ZEB1-223ENST00000561304 A0A0G2JLL6 359 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-223ENST00000561304 PDHXO00330 501 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 TLR2O60603 784 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 PRSS12P56730 875 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 JAG1P78504 1218 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 PRRT2Q7Z6L0 340 aaPredicted RBP9.05□□□□□ -0.96
ZEB1-223ENST00000561304 ANKRD23Q86SG2 305 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 MAPKAPK5Q8IW41 473 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 EFCC1Q9HA90 598 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 ZCCHC17Q9NP64 241 aaKnown RBP9.05□□□□□ -0.96
ZEB1-223ENST00000561304 PTCH2Q9Y6C5 1203 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
ZEB1-223ENST00000561304 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
ZEB1-223ENST00000561304 CYP2C8P10632 490 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 MS4A1P11836 297 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 PPP4CP60510 307 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 LACTBP83111 547 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-223ENST00000561304 C17orf99Q6UX52 265 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 ERC1Q8IUD2 1116 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 RPAP2Q8IXW5 612 aaPredicted RBP9.04□□□□□ -0.96
ZEB1-223ENST00000561304 MAGEB6Q8N7X4 407 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 MIGA1Q8NAN2 632 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 TGFBRAP1Q8WUH2 860 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.04□□□□□ -0.96
ZEB1-223ENST00000561304 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
ZEB1-223ENST00000561304 RLFQ13129 1914 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 CXCL11O14625 94 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 CTNND1O60716 968 aaKnown RBP9.03□□□□□ -0.96
ZEB1-223ENST00000561304 MAP4K4O95819 1239 aaPredicted RBP9.03□□□□□ -0.96
ZEB1-223ENST00000561304 BCRP11274 1271 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 CYP7A1P22680 504 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 GADL1Q6ZQY3 521 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 PACS2Q86VP3 889 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 EDC3Q96F86 508 aaKnown RBP9.03□□□□□ -0.96
ZEB1-223ENST00000561304 NOL10Q9BSC4 688 aaKnown RBP9.03□□□□□ -0.96
ZEB1-223ENST00000561304 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
ZEB1-223ENST00000561304 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 FRMPD3Q5JV73 1810 aa9.03□□□□□ -0.96
ZEB1-223ENST00000561304 COL11A1P12107 1806 aaPredicted RBP9.02□□□□□ -0.96
ZEB1-223ENST00000561304 BAG3O95817 575 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 CHGBP05060 677 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 METTL16Q86W50 562 aaKnown RBP9.02□□□□□ -0.97
ZEB1-223ENST00000561304 ARMC5Q96C12 935 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 KIF1BPQ96EK5 621 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 RIOK1Q9BRS2 568 aaKnown RBP9.02□□□□□ -0.97
ZEB1-223ENST00000561304 NPDC1Q9NQX5 325 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-223ENST00000561304 ALPK3Q96L96 1907 aa9.02□□□□□ -0.97
ZEB1-223ENST00000561304 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
ZEB1-223ENST00000561304 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 SMARCA5O60264 1052 aaPredicted RBP9.01□□□□□ -0.97
ZEB1-223ENST00000561304 HMMRO75330 724 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 GDF11O95390 407 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 PDE6AP16499 860 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 CAP2P40123 477 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 PDE3AQ14432 1141 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 HSP90AB4PQ58FF6 505 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 SH3TC2Q8TF17 1288 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 ZNF333Q96JL9 665 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 PARK7Q99497 189 aaKnown RBP9.01□□□□□ -0.97
ZEB1-223ENST00000561304 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
ZEB1-223ENST00000561304 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 HERC5Q9UII4 1024 aaKnown RBP9.01□□□□□ -0.97
ZEB1-223ENST00000561304 A0A0G2JMZ2 1700 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 MYH4Q9Y623 1939 aa9.01□□□□□ -0.97
ZEB1-223ENST00000561304 TCRBV5S4A2TA0A5A2 114 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 GOLIM4O00461 696 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
ZEB1-223ENST00000561304 PSMC4P43686 418 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 HMGCS2P54868 508 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 SPP2Q13103 211 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 FASTKD5Q7L8L6 764 aaKnown RBP9□□□□□ -0.97
ZEB1-223ENST00000561304 CLASRPQ8N2M8 674 aaKnown RBP9□□□□□ -0.97
ZEB1-223ENST00000561304 ZNF280CQ8ND82 737 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9□□□□□ -0.97
ZEB1-223ENST00000561304 DHX36Q9H2U1 1008 aaKnown RBP9□□□□□ -0.97
ZEB1-223ENST00000561304 AGTPBP1Q9UPW5 1226 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 DNAH12Q6ZR08 3092 aa9□□□□□ -0.97
ZEB1-223ENST00000561304 IGSF3O75054 1194 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 RAB11FIP3O75154 756 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-223ENST00000561304 EN2P19622 333 aaPredicted RBP8.99□□□□□ -0.97
ZEB1-223ENST00000561304 PRKCZQ05513 592 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 MAP3K12Q12852 859 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 PTGDRQ13258 359 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 MTMR2Q13614 643 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 SLC9C1Q4G0N8 1177 aa8.99□□□□□ -0.97
ZEB1-223ENST00000561304 TTC13Q8NBP0 860 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms