RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 HMGCRP04035 888 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 CAPN2P17655 700 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 ADD2P35612 726 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 GABPAQ06546 454 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 USP17L24Q0WX57 530 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 HABP4Q5JVS0 413 aaKnown RBP19.74■□□□□ 0.75
CRTC3-212ENST00000561218 ACER1Q8TDN7 264 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 PAGR1Q9BTK6 254 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 HTATIP2Q9BUP3 242 aa19.74■□□□□ 0.75
CRTC3-212ENST00000561218 DCP1AQ9NPI6 582 aaPredicted RBP19.74■□□□□ 0.75
CRTC3-212ENST00000561218 MPHOSPH10O00566 681 aaKnown RBP19.73■□□□□ 0.75
CRTC3-212ENST00000561218 SMARCA5O60264 1052 aaPredicted RBP19.73■□□□□ 0.75
CRTC3-212ENST00000561218 MBD4O95243 580 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 MAPK4P31152 587 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 ERVK-9P63128 1117 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 ERVK-24P63145 666 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 UBE2Q1Q7Z7E8 422 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 NUDT12Q9BQG2 462 aa19.73■□□□□ 0.75
CRTC3-212ENST00000561218 PAK6Q9NQU5 681 aaPredicted RBP19.73■□□□□ 0.75
CRTC3-212ENST00000561218 CYP2D6P10635 497 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 CYP2B6P20813 491 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 SEPT2Q15019 361 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 Q3C1V9 767 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 SLFNL1Q499Z3 407 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 SOCS4Q8WXH5 440 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.72■□□□□ 0.75
CRTC3-212ENST00000561218 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
CRTC3-212ENST00000561218 ATP8A2Q9NTI2 1148 aa19.72■□□□□ 0.75
CRTC3-212ENST00000561218 DOCK3Q8IZD9 2030 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 PRKAB2O43741 272 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 VCAM1P19320 739 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 GUCY1A2P33402 732 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 EVX2Q03828 476 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 ZSCAN25Q6NSZ9 544 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 CATSPERGQ6ZRH7 1159 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 DDRGK1Q96HY6 314 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 RABGAP1Q9Y3P9 1069 aa19.71■□□□□ 0.75
CRTC3-212ENST00000561218 XRCC5P13010 732 aaKnown RBP19.7■□□□□ 0.74
CRTC3-212ENST00000561218 CCNA1P78396 465 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 PLEKHH3Q7Z736 793 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 AMOTL1Q8IY63 956 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 CRISPLD2Q9H0B8 497 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 PORCNQ9H237 461 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 HMX1Q9NP08 348 aaPredicted RBP19.7■□□□□ 0.74
CRTC3-212ENST00000561218 ECHDC1Q9NTX5 307 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 SWAP70Q9UH65 585 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 NR2E3Q9Y5X4 410 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 RPTORQ8N122 1335 aa19.7■□□□□ 0.74
CRTC3-212ENST00000561218 TRIM32Q13049 653 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 POTEEQ6S8J3 1075 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 TMEM179Q6ZVK1 233 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 GPR142Q7Z601 462 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 TRMT44Q8IYL2 757 aaKnown RBP19.69■□□□□ 0.74
CRTC3-212ENST00000561218 SLC44A5Q8NCS7 719 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 TRIB2Q92519 343 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 DYNLL2Q96FJ2 89 aa19.69■□□□□ 0.74
CRTC3-212ENST00000561218 RPAP3Q9H6T3 665 aaPredicted RBP19.69■□□□□ 0.74
CRTC3-212ENST00000561218 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
CRTC3-212ENST00000561218 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
CRTC3-212ENST00000561218 RGS2P41220 211 aa19.68■□□□□ 0.74
CRTC3-212ENST00000561218 GPATCH3Q96I76 525 aa19.68■□□□□ 0.74
CRTC3-212ENST00000561218 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
CRTC3-212ENST00000561218 SLC4A4Q9Y6R1 1079 aa19.68■□□□□ 0.74
CRTC3-212ENST00000561218 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
CRTC3-212ENST00000561218 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
CRTC3-212ENST00000561218 USP17L21D6R901 530 aa19.67■□□□□ 0.74
CRTC3-212ENST00000561218 CHGBP05060 677 aa19.67■□□□□ 0.74
CRTC3-212ENST00000561218 ZKSCAN1P17029 563 aaPredicted RBP19.67■□□□□ 0.74
CRTC3-212ENST00000561218 WDR78Q5VTH9 848 aa19.67■□□□□ 0.74
CRTC3-212ENST00000561218 CYP2D7A0A087X1C5 515 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 CNMDO75829 334 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 PRKAR2AP13861 404 aaKnown RBP19.66■□□□□ 0.74
CRTC3-212ENST00000561218 MORN1Q5T089 497 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 C12orf60Q5U649 245 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 LBX2Q6XYB7 198 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 USP6NLQ92738 828 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 PAWRQ96IZ0 340 aaKnown RBP19.66■□□□□ 0.74
CRTC3-212ENST00000561218 CCDC17Q96LX7 622 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 TANGO6Q9C0B7 1094 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 HOXC10Q9NYD6 342 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 NAV1Q8NEY1 1877 aa19.66■□□□□ 0.74
CRTC3-212ENST00000561218 DDX60LQ5H9U9 1706 aaKnown RBP19.65■□□□□ 0.74
CRTC3-212ENST00000561218 AKR1B1P15121 316 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 CDK8P49336 464 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 COG2Q14746 738 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 MAP3K21Q5TCX8 1036 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 NECAB2Q7Z6G3 386 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 ANKLE1Q8NAG6 615 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 PUS7LQ9H0K6 701 aaKnown RBP19.65■□□□□ 0.74
CRTC3-212ENST00000561218 ARHGEF10LQ9HCE6 1279 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 BTBD7Q9P203 1132 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 PCDH10Q9P2E7 1040 aa19.65■□□□□ 0.74
CRTC3-212ENST00000561218 SPDYE16A6NNV3 312 aaPredicted RBP19.64■□□□□ 0.73
CRTC3-212ENST00000561218 EVI5O60447 810 aa19.64■□□□□ 0.73
CRTC3-212ENST00000561218 MAP2K5Q13163 448 aa19.64■□□□□ 0.73
CRTC3-212ENST00000561218 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
CRTC3-212ENST00000561218 APBA2Q99767 749 aa19.64■□□□□ 0.73
CRTC3-212ENST00000561218 SH2D4AQ9H788 454 aa19.64■□□□□ 0.73
CRTC3-212ENST00000561218 IVNS1ABPQ9Y6Y0 642 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms