RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TXKP42681 527 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 BNIP3Q12983 259 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 HDXQ7Z353 690 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 PUS7Q96PZ0 661 aaKnown RBP6.29□□□□□ -1.4
TMOD3-207ENST00000560549 BACH2Q9BYV9 841 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 SNCAIPQ9Y6H5 919 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 SAMD9Q5K651 1589 aa6.29□□□□□ -1.4
TMOD3-207ENST00000560549 FAM221AA4D161 298 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 CEACAM5P06731 702 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 ITGAEP38570 1179 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 PRKCQQ04759 706 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 JARID2Q92833 1246 aaPredicted RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 COPRSQ9NQ92 184 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 VAV3Q9UKW4 847 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 RNF114Q9Y508 228 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 CORINQ9Y5Q5 1042 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 FYCO1Q9BQS8 1478 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 CTTNBP2Q8WZ74 1663 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 DHX57Q6P158 1386 aaKnown RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 PRR33A8MZF0 331 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 IGF2BP3O00425 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 PF4P02776 101 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 ITIH2P19823 946 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 GARTP22102 1010 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 ETF1P62495 437 aaKnown RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 IFI16Q16666 785 aaKnown RBP6.28□□□□□ -1.4
TMOD3-207ENST00000560549 TSNAXIP1Q2TAA8 658 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 MRS2Q9HD23 443 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
TMOD3-207ENST00000560549 FMN1Q68DA7 1419 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 PRG4Q92954 1404 aaPredicted RBP6.27□□□□□ -1.41
TMOD3-207ENST00000560549 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 ERCC6L2Q5T890 1561 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 LRIG2O94898 1065 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 F13A1P00488 732 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 CD8BP10966 210 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 TCF3P15923 654 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
TMOD3-207ENST00000560549 FUT4P22083 530 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 CAP2P40123 477 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 RPL6Q02878 288 aaKnown RBP6.27□□□□□ -1.41
TMOD3-207ENST00000560549 FAM160A1Q05DH4 1040 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
TMOD3-207ENST00000560549 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
TMOD3-207ENST00000560549 DISP3Q9P2K9 1392 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 CILPO75339 1184 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 LMNB2Q03252 620 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 FAM50AQ14320 339 aaKnown RBP6.26□□□□□ -1.41
TMOD3-207ENST00000560549 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 ERMP1Q7Z2K6 904 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 KCT2Q8NC54 265 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 FBXO27Q8NI29 283 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 ACSF2Q96CM8 615 aaPredicted RBP6.26□□□□□ -1.41
TMOD3-207ENST00000560549 MIPEPQ99797 713 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 FOXQ1Q9C009 403 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 KBTBD4Q9NVX7 518 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 SNX11Q9Y5W9 270 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
TMOD3-207ENST00000560549 TMEM265A0A087WTH1 108 aa6.25□□□□□ -1.41
TMOD3-207ENST00000560549 PAPLNO95428 1278 aa6.25□□□□□ -1.41
TMOD3-207ENST00000560549 HDLBPQ00341 1268 aaKnown RBP6.25□□□□□ -1.41
TMOD3-207ENST00000560549 HID1Q8IV36 788 aa6.25□□□□□ -1.41
TMOD3-207ENST00000560549 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
TMOD3-207ENST00000560549 RSRP1Q9BUV0 290 aa6.25□□□□□ -1.41
TMOD3-207ENST00000560549 POLR3KQ9Y2Y1 108 aaPredicted RBP6.25□□□□□ -1.41
TMOD3-207ENST00000560549 MAGI3Q5TCQ9 1506 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 CARMIL2Q6F5E8 1435 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 CST3P01034 146 aaPredicted RBP6.24□□□□□ -1.41
TMOD3-207ENST00000560549 PGRP06401 933 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 LMNB1P20700 586 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 GBP2P32456 591 aaPredicted RBP6.24□□□□□ -1.41
TMOD3-207ENST00000560549 ZNF792Q3KQV3 632 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 METTL16Q86W50 562 aaKnown RBP6.24□□□□□ -1.41
TMOD3-207ENST00000560549 GATAD2BQ8WXI9 593 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 DISP1Q96F81 1524 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 UGGT2Q9NYU1 1516 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 RAB3GAP2Q9H2M9 1393 aa6.24□□□□□ -1.41
TMOD3-207ENST00000560549 DNAJA2O60884 412 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 RLBP1P12271 317 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 FANCCQ00597 558 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 LETMD1Q6P1Q0 360 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 MRPL41Q8IXM3 137 aaKnown RBP6.23□□□□□ -1.41
TMOD3-207ENST00000560549 ASIC4Q96FT7 647 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 TMEM87BQ96K49 555 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
TMOD3-207ENST00000560549 MBNL3Q9NUK0 354 aaKnown RBP6.23□□□□□ -1.41
TMOD3-207ENST00000560549 GTF2IRD1Q9UHL9 959 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms