RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 IVNS1ABPQ9Y6Y0 642 aa12.85□□□□□ -0.35
CDC42BPB-207ENST00000560492 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 USP5P45974 858 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 CCNA1P78396 465 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 MFSD14CQ5VZR4 134 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 FOXP4Q8IVH2 680 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 MIER1Q8N108 512 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 FAM161BQ96MY7 647 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 SENP6Q9GZR1 1112 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
CDC42BPB-207ENST00000560492 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 GH2P01242 217 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 JAG1P78504 1218 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 MTX1Q13505 466 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 RAB3GAP1Q15042 981 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 Q3C1V9 767 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
CDC42BPB-207ENST00000560492 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 CYP7A1P22680 504 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 MAP2K5Q13163 448 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 DBNDD2Q9BQY9 259 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 MYH8P13535 1937 aa12.82□□□□□ -0.36
CDC42BPB-207ENST00000560492 NAV1Q8NEY1 1877 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 IDH1O75874 414 aaKnown RBP12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 ZAP70P43403 619 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 TNNI3KQ59H18 835 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 MORN1Q5T089 497 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 FPGT-TNNI3KV9GXZ4 949 aa12.81□□□□□ -0.36
CDC42BPB-207ENST00000560492 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 COL6A1P12109 1028 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP14P54578 494 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 PPP4CP60510 307 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 RASEFQ8IZ41 740 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 USP6NLQ92738 828 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 DDX20Q9UHI6 824 aaKnown RBP12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 TNNQ9UQP3 1299 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
CDC42BPB-207ENST00000560492 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 MPHOSPH10O00566 681 aaKnown RBP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 MSCO60682 206 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 TRIM27P14373 513 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 CYP2C19P33261 490 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
CDC42BPB-207ENST00000560492 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 UNC80Q8N2C7 3258 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 VCAM1P19320 739 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 PTPREP23469 700 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 RTP1P59025 263 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 MAGEB6Q8N7X4 407 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 FLRT1Q9NZU1 646 aa12.78□□□□□ -0.36
CDC42BPB-207ENST00000560492 BCAR3O75815 825 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 CNMDO75829 334 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 PLS1Q14651 629 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 TTC6Q86TZ1 520 aa12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 METTL16Q86W50 562 aaKnown RBP12.77□□□□□ -0.37
CDC42BPB-207ENST00000560492 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms