RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LOC285556D6RIA3 1793 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 IGF2BP3O00425 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 RASA1P20936 1047 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 PTPN18Q99952 460 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 U3KPZ7 1027 aaPredicted RBP16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 GREB1LQ9C091 1923 aaPredicted RBP16.58■□□□□ 0.24
PKNOX1-209ENST00000560448 PCNTO95613 3336 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 BTBD19C9JJ37 291 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 TRPA1O75762 1119 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 AKR1B1P15121 316 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 EVX2Q03828 476 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 ICA1Q05084 483 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 MTMR2Q13614 643 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 SEPT2Q15019 361 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 C8orf34Q49A92 452 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 LPAR1Q92633 364 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 FEZ1Q99689 392 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 ESYT1Q9BSJ8 1104 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
PKNOX1-209ENST00000560448 FOXN1O15353 648 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 JAG1P78504 1218 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 MOGSQ13724 837 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 TAF1CQ15572 869 aaPredicted RBP16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 NYAP2Q9P242 653 aa16.56■□□□□ 0.24
PKNOX1-209ENST00000560448 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 PDHXO00330 501 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 HMGCS2P54868 508 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 IL25Q9H293 177 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 TMX2Q9Y320 296 aa16.55■□□□□ 0.24
PKNOX1-209ENST00000560448 TLR2O60603 784 aa16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 HSPA8P11142 646 aaKnown RBP16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 ESR2Q92731 530 aa16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-209ENST00000560448 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 TTLL1O95922 423 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 OSBPP22059 807 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 CTDSPL2Q05D32 466 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 GPAT2Q6NUI2 795 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 CCDC84Q86UT8 332 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 KRT23Q9C075 422 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 PRDM1O75626 825 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 TFAP4Q01664 338 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 TRDNQ13061 729 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 CRHR2Q13324 411 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 MKL1Q969V6 931 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 MTMR4Q9NYA4 1195 aa16.53■□□□□ 0.24
PKNOX1-209ENST00000560448 REC8O95072 547 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 GCLCP48506 637 aaPredicted RBP16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 HAND2P61296 217 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 ARHGEF6Q15052 776 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 IFFO2Q5TF58 517 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 RNF20Q5VTR2 975 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 TTC14Q96N46 770 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 VCPKMTQ9H867 229 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 ANO2Q9NQ90 1003 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 TOMM22Q9NS69 142 aa16.52■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 GPR25O00155 361 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 WDR46O15213 610 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 RANBP6O60518 1105 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 TBC1D8O95759 1140 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 NOVP48745 357 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
PKNOX1-209ENST00000560448 IQCA1Q86XH1 822 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms