RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 IGSF3O75054 1194 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 TGFB2P61812 414 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 PKN1Q16512 942 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 PSMD1Q99460 953 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 GOLGA6L4A6NEF3 574 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 FUT2Q10981 343 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 NR5A1Q13285 461 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 TRIM29Q14134 588 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 CAMK4Q16566 473 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 SH3BP5LQ7L8J4 393 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 SERPINB13Q9UIV8 391 aa12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 ZNF646O15015 1829 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-211ENST00000560433 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 AKAP17AQ02040 695 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 RASSF7Q02833 373 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 NID2Q14112 1375 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 FSD2A1L4K1 749 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 DEXIO95424 95 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 ATP2B1P20020 1258 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 PTGER2P43116 358 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 GABPAQ06546 454 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 RSBN1LQ6PCB5 846 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 SERPINA10Q9UK55 444 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 MYH6P13533 1939 aa12.6□□□□□ -0.39
SNRPA1-211ENST00000560433 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 NFKBIEO00221 500 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 ADAMTS3O15072 1205 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 DDAH1O94760 285 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 XRCC6P12956 609 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 SHMT1P34896 483 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 CXCL9Q07325 125 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 NEDD1Q8NHV4 660 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 CNTNAP5Q8WYK1 1306 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 RAD21O60216 631 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 MARCKSP29966 332 aaPredicted RBP12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 ME1P48163 572 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
SNRPA1-211ENST00000560433 KIF13BQ9NQT8 1826 aa12.58□□□□□ -0.39
SNRPA1-211ENST00000560433 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 NR1I2O75469 434 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 MMP1P03956 469 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CALM1P0DP23 149 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CALM2P0DP24 149 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CALM3P0DP25 149 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.44e-9■■■□□ 16.8
SNRPA1-211ENST00000560433 ZNF396Q96N95 335 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 ZNRF3Q9ULT6 936 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 ELP1O95163 1332 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CYTH3O43739 400 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 GDF11O95390 407 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
SNRPA1-211ENST00000560433 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 EGFRP00533 1210 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 PRELPP51888 382 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 RCAN1P53805 252 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 STK38Q15208 465 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 SF3A1Q15459 793 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 WASF1Q92558 559 aa12.57□□□□□ -0.4
SNRPA1-211ENST00000560433 TCP11L1Q9NUJ3 509 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms