RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-215ENST00000560356 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
CPNE6-215ENST00000560356 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
CPNE6-215ENST00000560356 GJC2Q5T442 439 aaPredicted RBP18.54■□□□□ 0.56
CPNE6-215ENST00000560356 GORABQ5T7V8 394 aa18.54■□□□□ 0.56
CPNE6-215ENST00000560356 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
CPNE6-215ENST00000560356 TGFBRAP1Q8WUH2 860 aa18.54■□□□□ 0.56
CPNE6-215ENST00000560356 BADQ92934 168 aa18.54■□□□□ 0.56
CPNE6-215ENST00000560356 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
CPNE6-215ENST00000560356 A0A0G2JMZ2 1700 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 BAG3O95817 575 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 PLCG2P16885 1265 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 PTPREP23469 700 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 CYP2C19P33261 490 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 MCAMP43121 646 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 GRB14Q14449 540 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
CPNE6-215ENST00000560356 TRPV1Q8NER1 839 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 FEZ1Q99689 392 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 IVNS1ABPQ9Y6Y0 642 aa18.53■□□□□ 0.56
CPNE6-215ENST00000560356 HOXC6P09630 235 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 CYBAP13498 195 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 TRIM60Q495X7 471 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 NAA16Q6N069 864 aaPredicted RBP18.52■□□□□ 0.56
CPNE6-215ENST00000560356 SLC39A5Q6ZMH5 540 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.56
CPNE6-215ENST00000560356 NPLOC4Q8TAT6 608 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 C12orf42Q96LP6 360 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 MEIS3Q99687 375 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
CPNE6-215ENST00000560356 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 KBTBD13C9JR72 458 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 SRGAP3O43295 1099 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 GH2P01242 217 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 PDLIM7Q9NR12 457 aa18.51■□□□□ 0.55
CPNE6-215ENST00000560356 SAP30BPQ9UHR5 308 aaKnown RBP18.51■□□□□ 0.55
CPNE6-215ENST00000560356 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
CPNE6-215ENST00000560356 SNX17Q15036 470 aa18.5■□□□□ 0.55
CPNE6-215ENST00000560356 ANO1Q5XXA6 986 aa18.5■□□□□ 0.55
CPNE6-215ENST00000560356 ADGRA1Q86SQ6 560 aa18.5■□□□□ 0.55
CPNE6-215ENST00000560356 ARRDC4Q8NCT1 418 aa18.5■□□□□ 0.55
CPNE6-215ENST00000560356 ARHGAP45Q92619 1136 aa18.5■□□□□ 0.55
CPNE6-215ENST00000560356 TMEM265A0A087WTH1 108 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
CPNE6-215ENST00000560356 GNAI3P08754 354 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 VCAM1P19320 739 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 COL9A1P20849 921 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
CPNE6-215ENST00000560356 PPP4CP60510 307 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 CATSPERGQ6ZRH7 1159 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 BTBD7Q9P203 1132 aa18.49■□□□□ 0.55
CPNE6-215ENST00000560356 NAV1Q8NEY1 1877 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 IGHA2P01877 340 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 UQCRFS1P1P0C7P4 283 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 TJAP1Q5JTD0 557 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 LBX2Q6XYB7 198 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 SH3RF1Q7Z6J0 888 aa18.48■□□□□ 0.55
CPNE6-215ENST00000560356 ZNFX1Q9P2E3 1918 aaKnown RBP18.48■□□□□ 0.55
CPNE6-215ENST00000560356 PARP14Q460N5 1801 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 TRIM43BA6NCK2 446 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
CPNE6-215ENST00000560356 USP14P54578 494 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 MTX1Q13505 466 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 DPP9Q86TI2 863 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 USP38Q8NB14 1042 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 TRIM43Q96BQ3 446 aaPredicted RBP18.47■□□□□ 0.55
CPNE6-215ENST00000560356 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
CPNE6-215ENST00000560356 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 PLXNA1Q9UIW2 1896 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 MYH8P13535 1937 aa18.47■□□□□ 0.55
CPNE6-215ENST00000560356 SMCHD1A6NHR9 2005 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 TNFRSF10AO00220 468 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 SEPT4O43236 478 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 ADORA2AP29274 412 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 OLFML2BQ68BL8 750 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 KIAA1683Q9H0B3 1180 aa18.46■□□□□ 0.55
CPNE6-215ENST00000560356 ADCYAP1R1P41586 468 aa18.45■□□□□ 0.54
CPNE6-215ENST00000560356 ACER1Q8TDN7 264 aa18.45■□□□□ 0.54
CPNE6-215ENST00000560356 FERMT2Q96AC1 680 aa18.45■□□□□ 0.54
CPNE6-215ENST00000560356 RPAP3Q9H6T3 665 aaPredicted RBP18.45■□□□□ 0.54
CPNE6-215ENST00000560356 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
CPNE6-215ENST00000560356 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
CPNE6-215ENST00000560356 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
CPNE6-215ENST00000560356 LRRC41Q15345 812 aa18.44■□□□□ 0.54
CPNE6-215ENST00000560356 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
CPNE6-215ENST00000560356 C1orf53Q5VUE5 145 aa18.44■□□□□ 0.54
CPNE6-215ENST00000560356 TATDN1Q6P1N9 297 aa18.44■□□□□ 0.54
CPNE6-215ENST00000560356 ITGB8P26012 769 aa18.43■□□□□ 0.54
CPNE6-215ENST00000560356 EPHB4P54760 987 aa18.43■□□□□ 0.54
CPNE6-215ENST00000560356 TLE2Q04725 743 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms