RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 SPG7Q9UQ90 795 aa5.3□□□□□ -1.56
AC066612.1-201ENST00000560339 WASH4PA8MWX3 477 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 USP17L7P0C7H9 530 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 BMP7P18075 431 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 TMEM132EQ6IEE7 984 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 TTBK2Q6IQ55 1244 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 ZNF605Q86T29 641 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 RELTQ969Z4 430 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 SYTL4Q96C24 671 aaPredicted RBP5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 SETDB2Q96T68 719 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 SLC6A17Q9H1V8 727 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 TRIT1Q9H3H1 467 aaKnown RBP5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 ZCCHC4Q9H5U6 513 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 C19orf44Q9H6X5 657 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 FAM8A1Q9UBU6 413 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 GTF3C3Q9Y5Q9 886 aa5.29□□□□□ -1.56
AC066612.1-201ENST00000560339 PGRP06401 933 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 SRFP11831 508 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 EGR3Q06889 387 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 SV2BQ7L1I2 683 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 ZSCAN29Q8IWY8 852 aaPredicted RBP5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 OXR1Q8N573 874 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 RETREG2Q8NC44 543 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 PDZD8Q8NEN9 1154 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 C20orf173Q96LM9 149 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 C12orf49Q9H741 205 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 PARD6AQ9NPB6 346 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 GPATCH2Q9NW75 528 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 WWC3Q9ULE0 1092 aa5.28□□□□□ -1.56
AC066612.1-201ENST00000560339 LTKP29376 864 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 DLG4P78352 724 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 IRF2BP1Q8IU81 584 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 LILRA2Q8N149 483 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 Q96M66 194 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 MCOLN1Q9GZU1 580 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 CNOT6Q9ULM6 557 aaKnown RBP5.27□□□□□ -1.57
AC066612.1-201ENST00000560339 ZGLP1P0C6A0 271 aa5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 PDE6BP35913 854 aa5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 SEPT6Q14141 434 aa5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 MRPL41Q8IXM3 137 aaKnown RBP5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 BAHD1Q8TBE0 780 aaPredicted RBP5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 DHX38Q92620 1227 aaKnown RBP5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 TMEM87BQ96K49 555 aa5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 DUSP15Q9H1R2 295 aaPredicted RBP5.26□□□□□ -1.57
AC066612.1-201ENST00000560339 MYOCOSA0A1B0GUC4 107 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 FITM1A5D6W6 292 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 SEMA7AO75326 666 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 FMR1Q06787 632 aaKnown RBP eCLIP5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 PDE4BQ07343 736 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 CCDC85BQ15834 202 aaPredicted RBP5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 ZNF385BQ569K4 471 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 TCERG1LQ5VWI1 586 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 ARID3AQ99856 593 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 CWC22Q9HCG8 908 aaKnown RBP5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 KCNH3Q9ULD8 1083 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 PCDHB5Q9Y5E4 795 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 TACC3Q9Y6A5 838 aa5.25□□□□□ -1.57
AC066612.1-201ENST00000560339 RFXAPO00287 272 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 GFRA2O00451 464 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 PEX10O60683 326 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 GAB4Q2WGN9 574 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 TIGD5Q53EQ6 642 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 TSPYL5Q86VY4 417 aaPredicted RBP5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 INTS4Q96HW7 963 aaKnown RBP5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 GPR160Q9UJ42 338 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 CEP131Q9UPN4 1083 aa5.24□□□□□ -1.57
AC066612.1-201ENST00000560339 TEX51A0A1B0GUA7 166 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 FOXD2O60548 495 aaPredicted RBP5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 RPS26P62854 115 aaKnown RBP5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 MAP3K11Q16584 847 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 SPPL2CQ8IUH8 684 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 MCATQ8IVS2 390 aaKnown RBP5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 DTWD2Q8NBA8 298 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 DNAJB8Q8NHS0 232 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 GPR62Q9BZJ7 368 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 SP110Q9HB58 689 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 GNEQ9Y223 722 aaKnown RBP5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 YBX2Q9Y2T7 364 aaKnown RBP5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 KCTD3Q9Y597 815 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 PCDHA11Q9Y5I1 949 aa5.23□□□□□ -1.57
AC066612.1-201ENST00000560339 A0A0G2JLL6 359 aaPredicted RBP5.22□□□□□ -1.57
AC066612.1-201ENST00000560339 CHRNEQ04844 493 aa5.22□□□□□ -1.57
AC066612.1-201ENST00000560339 NFIXQ14938 502 aa5.22□□□□□ -1.57
AC066612.1-201ENST00000560339 NR0B2Q15466 257 aa5.22□□□□□ -1.57
AC066612.1-201ENST00000560339 MIR1-1HGQ9H1L0 117 aa5.22□□□□□ -1.57
AC066612.1-201ENST00000560339 SYN1P17600 705 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 EIF4BP23588 611 aaKnown RBP5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 DUSP4Q13115 394 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 SNX17Q15036 470 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 DIEXFQ68CQ4 756 aaKnown RBP5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 C14orf37Q86TY3 774 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 TMEM151BQ8IW70 566 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 ACSF2Q96CM8 615 aaPredicted RBP5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 FRMD6Q96NE9 622 aa5.21□□□□□ -1.58
AC066612.1-201ENST00000560339 ASB16Q96NS5 453 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms