RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 USP17L12C9JPN9 530 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 USP17L21D6R901 530 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 VCAM1P19320 739 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 GRK4P32298 578 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 FCGRTP55899 365 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 HERVK_113P62684 666 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 ABCB5Q2M3G0 1257 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 CERKLQ49MI3 558 aaPredicted RBP14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 KIAA1683Q9H0B3 1180 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 UNC93B1Q9H1C4 597 aa14.1□□□□□ -0.15
AC104041.1-202ENST00000560097 FRMPD3Q5JV73 1810 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 GNRH1P01148 92 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 PRMT2P55345 433 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 KIF22Q14807 665 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 RAB3GAP1Q15042 981 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 TTC6Q86TZ1 520 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 CERS3Q8IU89 383 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 USP6NLQ92738 828 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 AS3MTQ9HBK9 375 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 BTBD7Q9P203 1132 aa14.09□□□□□ -0.15
AC104041.1-202ENST00000560097 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 IGHDP01880 384 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 POLR3DP05423 398 aaPredicted RBP14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 CCL5P13501 91 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 CDK8P49336 464 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 IRF5Q13568 498 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L2Q6R6M4 530 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 C16orf86Q6ZW13 317 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 RANBP2P49792 3224 aaKnown RBP14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 ROBO3Q96MS0 1386 aa14.08□□□□□ -0.16
AC104041.1-202ENST00000560097 TNPO2O14787 897 aaKnown RBP14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 ADCY3O60266 1144 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 INHAP05111 366 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 CATSPERGQ6ZRH7 1159 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 NKX2-3Q8TAU0 364 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 RAET1EQ8TD07 263 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 TRIB2Q92519 343 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 PCDH10Q9P2E7 1040 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 SLC4A4Q9Y6R1 1079 aa14.07□□□□□ -0.16
AC104041.1-202ENST00000560097 CEP290O15078 2479 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 RNF113AO15541 343 aaKnown RBP14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 IGHA2P01877 340 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 RASA1P20936 1047 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 GCLCP48506 637 aaPredicted RBP14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 ERVK-9P63128 1117 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 ERVK-24P63145 666 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 CCL14Q16627 93 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 CCDC129Q6ZRS4 1044 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 APPBP2Q92624 585 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
AC104041.1-202ENST00000560097 MYH4Q9Y623 1939 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 GPAA1O43292 621 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 IRX3P78415 501 aaPredicted RBP14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 ZMYM1Q5SVZ6 1142 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 MORN1Q5T089 497 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 LBX2Q6XYB7 198 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 PAGR1Q9BTK6 254 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 TRIM34Q9BYJ4 488 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 RPAP3Q9H6T3 665 aaPredicted RBP14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 PAK6Q9NQU5 681 aaPredicted RBP14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 STAP2Q9UGK3 403 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
AC104041.1-202ENST00000560097 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 MX1P20591 662 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 GJA8P48165 433 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 SBK1Q52WX2 424 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 VPS53Q5VIR6 699 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 STK11IPQ8N1F8 1099 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 PXYLP1Q8TE99 480 aa14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L15C9J2P7 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L13C9JLJ4 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L11C9JVI0 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L18D6R9N7 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L22D6RA61 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L17D6RBQ6 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L19D6RCP7 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L20D6RJB6 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 GJB1P08034 283 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 HOXD10P28358 340 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 PDE1AP54750 535 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 USP17L24Q0WX57 530 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 ARHGEF6Q15052 776 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 MAP3K21Q5TCX8 1036 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 TMEM179Q6ZVK1 233 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 GPR142Q7Z601 462 aa14.03□□□□□ -0.16
AC104041.1-202ENST00000560097 NBPF11Q86T75 865 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms