RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 GRM8O00222 908 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 SRGAP2O75044 1071 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 PPP1R37O75864 691 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 NDUFA10O95299 355 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 ATP1A2P50993 1020 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.21
ZEB1-217ENST00000559858 APBA1Q02410 837 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 NNTQ13423 1086 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 ZNF827Q17R98 1081 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 EMBQ6PCB8 327 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 KSR2Q6VAB6 950 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 TAX1BP1Q86VP1 789 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 NLRP14Q86W24 1093 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 FAM228AQ86W67 206 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 TICAM2Q86XR7 235 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 VPS37DQ86XT2 251 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 KBTBD3Q8NAB2 608 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 TATDN2Q93075 761 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 RSRC1Q96IZ7 334 aaKnown RBP7.46□□□□□ -1.21
ZEB1-217ENST00000559858 SCLT1Q96NL6 688 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 HAUS7Q99871 368 aa7.46□□□□□ -1.21
ZEB1-217ENST00000559858 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.21
ZEB1-217ENST00000559858 KLF18A0A0U1RQI7 1052 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 FAM107AO95990 144 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 GCKP35557 465 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
ZEB1-217ENST00000559858 ZNF662Q6ZS27 426 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 MYCBPAPQ8TBZ2 947 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 HOOK2Q96ED9 719 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 RRP36Q96EU6 259 aaKnown RBP7.46□□□□□ -1.22
ZEB1-217ENST00000559858 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
ZEB1-217ENST00000559858 NUP88Q99567 741 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-217ENST00000559858 ALG1Q9BT22 464 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 SERTAD1Q9UHV2 236 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 UTYO14607 1347 aa7.46□□□□□ -1.22
ZEB1-217ENST00000559858 FLT4P35916 1363 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 ANO9A1A5B4 782 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 FRMD3A2A2Y4 597 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 POLR2DO15514 142 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CHGBP05060 677 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 KRT9P35527 623 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 ITIH3Q06033 890 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CCDC122Q5T0U0 273 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 FAM43BQ6ZT52 329 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CAVIN3Q969G5 261 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 KAZALD1Q96I82 304 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 GPHNQ9NQX3 736 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 ETAA1Q9NY74 926 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 DBF4Q9UBU7 674 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 TRIM10Q9UDY6 481 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 DBNLQ9UJU6 430 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 REXO2Q9Y3B8 237 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 WDR17Q8IZU2 1322 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 MYH8P13535 1937 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 PDE2AO00408 941 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CLSTN1O94985 981 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 ANXA1P04083 346 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 HSPD1P10809 573 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 RWDD2BP57060 319 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 KRT83P78385 493 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 C2orf54Q08AI8 447 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 E2F5Q15329 346 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CWF19L2Q2TBE0 894 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 NBPF9Q3BBW0 867 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 TNNI3KQ59H18 835 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 KRT40Q6A162 431 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 PPP4R3AQ6IN85 833 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 TSEN2Q8NCE0 465 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 C3orf20Q8ND61 904 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 LINS1Q8NG48 757 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 SPATA20Q8TB22 786 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CALR3Q96L12 384 aaKnown RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 FPGT-TNNI3KV9GXZ4 949 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 SYNRGQ9UMZ2 1314 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 MED1Q15648 1581 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-217ENST00000559858 MRC1P22897 1456 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 CHD1O14646 1710 aa7.45□□□□□ -1.22
ZEB1-217ENST00000559858 ANKRD18BA2A2Z9 1011 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 N4BP3O15049 544 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 KRT86O43790 486 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 MDH1P40925 334 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 HDLBPQ00341 1268 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 GUCY1A3Q02108 690 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 SPECC1Q5M775 1068 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 ZMYM1Q5SVZ6 1142 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 DDX46Q7L014 1031 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 SH2D3CQ8N5H7 860 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 C1orf131Q8NDD1 294 aaKnown RBP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 ZIM3Q96PE6 472 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 HOMER3Q9NSC5 361 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 A0A0G2JLW4 131 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 LRRC10BA6NIK2 292 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 PRC1O43663 620 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 CDKL5O76039 1030 aa7.44□□□□□ -1.22
ZEB1-217ENST00000559858 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
ZEB1-217ENST00000559858 RPSAP08865 295 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms